Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003958.1 Hibiscus syriacus cultivar Beakdansim tig00008558_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80102

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6017--6063
16
3.0
16
81
12
53
55
21
2
21
1.54
6038--6078
16
2.6
16
96
3
75
56
19
4
19
1.60
6081--6111
16
2.0
15
93
6
53
51
12
6
29
1.65
11183--11224
16
2.9
14
82
10
50
52
0
19
28
1.46
11183--11224
7
5.9
7
78
15
50
52
0
19
28
1.46
16146--16175
15
2.0
15
93
0
51
40
3
20
36
1.69
32663--32716
21
2.6
21
77
11
67
25
20
24
29
1.99
56063--56102
18
2.2
18
95
0
71
45
5
15
35
1.68
65110--65163
26
2.1
26
92
0
90
24
24
18
33
1.97
66432--66476
20
2.3
19
85
11
56
40
24
0
35
1.56
73393--74042
80
8.1
81
85
5
817
35
12
21
30
1.90
73393--74042
236
2.7
239
86
5
859
35
12
21
30
1.90
73430--74057
317
2.0
319
85
3
856
35
11
21
31
1.90
74430--74481
26
2.0
25
81
3
59
48
3
11
36
1.58
75099--75147
24
2.0
24
92
0
80
20
8
34
36
1.82

Tables:   1

The End!