Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003966.1 Hibiscus syriacus cultivar Beakdansim tig00008593_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59058

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
483--594
56
2.0
57
85
3
156
22
21
31
25
1.98
4459--4502
3
14.7
3
85
0
61
29
2
38
29
1.69
4639--4706
35
1.9
36
81
3
84
29
5
2
61
1.34
7212--7244
16
2.1
16
94
0
57
30
0
15
54
1.41
8502--8534
16
2.1
16
88
11
50
63
0
0
36
0.95
8576--8669
30
3.1
30
89
0
134
21
3
39
36
1.69
13023--13056
17
2.0
17
88
0
50
47
11
2
38
1.55
13552--13748
41
4.8
40
88
4
279
14
21
24
39
1.91
13613--13724
21
5.4
21
65
19
74
14
22
26
36
1.92
13552--13748
82
2.4
82
91
4
317
14
21
24
39
1.91
14693--14847
41
3.8
41
95
0
274
39
24
21
14
1.91
14737--14870
20
6.6
20
69
16
105
41
23
22
12
1.88
14720--14827
21
5.2
21
64
20
75
37
25
21
15
1.93
14780--14895
61
1.9
61
84
7
155
39
25
21
13
1.90
14696--14870
82
2.1
81
88
3
217
40
24
22
13
1.89
21250--21305
3
18.3
3
78
10
60
39
0
0
60
0.97
22803--22838
3
12.0
3
93
0
63
30
0
0
69
0.89
25972--26015
10
4.6
9
83
13
52
79
2
18
0
0.83
25967--26004
19
2.0
19
85
10
51
76
2
21
0
0.91
25972--26015
19
2.2
20
88
11
65
79
2
18
0
0.83
25983--26043
23
2.7
23
82
12
72
80
4
13
1
0.95
25988--26056
11
6.8
10
77
12
61
79
5
13
1
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32759--32873
51
2.3
49
82
11
126
36
5
8
49
1.56
34534--34575
21
2.0
21
100
0
84
33
9
14
42
1.78
35261--35294
3
11.7
3
87
6
52
0
26
2
70
1.01
35260--35294
17
2.1
17
94
0
61
0
25
2
71
1.00
37870--37894
13
1.9
13
100
0
50
48
40
4
8
1.51
38560--38611
23
2.4
22
81
9
61
57
9
0
32
1.31
38651--38701
11
4.7
11
72
13
52
45
3
0
50
1.20
38597--38819
104
2.1
104
84
4
299
44
8
1
44
1.44
38603--38813
68
3.1
69
79
7
223
44
8
1
45
1.45
38597--38824
36
6.6
35
77
13
177
43
8
2
45
1.47
39903--39947
22
2.0
22
87
8
65
17
28
22
31
1.97
39906--39956
22
2.2
23
79
6
59
21
21
21
35
1.96
43637--44112
258
1.8
258
79
2
544
26
23
22
27
1.99
47989--48036
17
2.7
18
77
6
53
81
4
2
12
0.93
47985--48036
27
1.9
27
88
7
79
80
3
3
11
0.97
50207--50235
12
2.3
13
94
5
51
41
0
0
58
0.98
50346--50375
14
2.1
15
93
6
53
40
10
0
50
1.36
52294--52374
34
2.4
34
97
0
153
45
24
4
24
1.73
53473--53507
2
17.5
2
93
0
61
51
2
0
45
1.16

Tables:   1

The End!