Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003970.1 Hibiscus syriacus cultivar Beakdansim tig00008605_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88714

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5545--5588
13
3.3
13
77
3
52
38
11
6
43
1.67
7333--7367
13
2.6
14
86
13
56
45
8
5
40
1.58
15075--15122
24
2.0
24
100
0
96
25
25
12
37
1.91
15787--15824
14
2.7
14
95
0
67
28
18
7
44
1.78
19404--19502
45
2.2
45
92
0
162
42
12
23
22
1.87
34349--34379
15
2.1
15
93
0
53
16
12
16
54
1.71
35939--35989
22
2.3
22
96
0
93
33
11
23
31
1.91
36509--36652
45
3.2
45
91
0
225
45
13
20
20
1.85
39263--39308
22
2.1
23
84
8
60
39
6
13
41
1.70
47435--47851
45
9.3
45
87
2
586
43
12
22
21
1.85
47431--47851
135
3.1
135
90
0
646
43
12
22
21
1.85
49456--49558
20
4.8
20
81
15
125
22
26
9
41
1.84
49475--49569
47
2.0
47
91
0
154
23
23
11
42
1.86
49978--50157
95
1.9
95
86
2
254
26
21
16
35
1.94
55764--55812
21
2.3
21
89
0
80
28
18
22
30
1.97
63710--63864
65
2.4
64
80
4
170
29
21
17
31
1.96
70083--70126
13
3.3
13
77
3
52
38
11
6
43
1.67
71872--71906
13
2.6
14
86
13
56
45
8
5
40
1.58
79703--79750
24
2.0
24
95
0
87
27
22
12
37
1.90
80416--80451
14
2.6
14
100
0
72
30
11
8
50
1.67
84030--84128
45
2.2
45
92
0
162
44
12
21
22
1.85

Tables:   1

The End!