Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003974.1 Hibiscus syriacus cultivar Beakdansim tig00008628_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52789

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5550--5592
20
2.2
19
83
4
50
25
16
30
27
1.97
7496--7532
15
2.4
16
95
4
67
13
0
24
62
1.31
9860--9938
31
2.5
31
80
8
97
30
13
16
39
1.88
10657--10691
17
2.0
18
94
5
63
74
2
0
22
0.95
12804--12845
19
2.2
19
91
4
66
19
0
9
71
1.13
12798--12845
19
2.4
21
79
13
64
18
0
10
70
1.15
12808--12857
19
2.5
19
83
6
55
24
2
8
66
1.29
12856--12893
18
2.1
19
85
5
51
76
5
10
7
1.15
17292--17340
21
2.3
21
96
0
89
28
24
18
28
1.98
17369--17490
64
1.9
63
86
5
174
33
21
19
25
1.97
25452--25488
19
2.0
18
89
5
56
18
16
5
59
1.55
26893--26922
10
3.0
10
95
0
51
10
26
10
53
1.66
29855--29921
34
2.0
34
93
0
116
17
11
17
52
1.74
30154--30375
111
2.0
111
91
1
365
26
27
22
23
2.00
38233--38283
3
17.0
3
80
8
59
33
3
1
60
1.26
38377--38450
25
3.0
25
90
2
105
39
18
13
28
1.89
52561--52700
47
3.2
42
71
14
115
27
30
17
24
1.97
52557--52761
89
2.3
91
88
4
292
27
27
19
25
1.98

Tables:   1

The End!