Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003976.1 Hibiscus syriacus cultivar Beakdansim tig00008635_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59981

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2001--2076
31
2.5
31
82
8
93
35
7
14
42
1.75
6797--6851
11
5.1
11
76
10
51
47
5
0
47
1.25
6774--6852
32
2.5
31
82
8
97
46
5
0
48
1.24
13542--13579
14
2.7
14
88
8
51
39
2
0
57
1.12
22054--22101
2
24.5
2
95
4
89
50
0
0
50
1.00
24645--24682
18
2.1
18
90
9
60
50
18
2
28
1.61
27787--27829
2
22.5
2
90
9
72
53
0
0
46
1.00
32680--32732
21
2.5
21
82
11
63
22
0
7
69
1.13
40427--40458
14
2.3
14
100
0
64
6
15
28
50
1.68
40428--40478
24
2.1
24
85
0
66
11
11
21
54
1.68
41500--41558
16
3.7
16
95
0
109
8
11
22
57
1.61
41624--41664
16
2.7
16
85
7
50
14
9
14
60
1.57
41881--41937
29
2.0
29
89
0
87
14
31
31
22
1.93
41996--42051
29
1.9
29
96
0
103
12
37
30
19
1.89
42069--42114
23
2.0
23
91
0
74
10
41
23
23
1.86
42077--42122
23
2.0
23
86
0
65
13
39
23
23
1.90
42092--42168
33
2.3
33
86
0
109
11
33
29
24
1.91
46262--46375
60
1.9
58
81
10
133
40
14
9
35
1.78
48322--48365
14
3.2
13
78
9
52
36
9
0
54
1.32
48321--48385
28
2.3
28
81
7
78
43
7
0
49
1.31
48955--49003
2
24.5
2
100
0
98
51
0
0
48
1.00
51962--51994
13
2.5
13
95
5
57
36
15
27
21
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55498--55546
25
2.0
23
81
14
55
48
4
0
46
1.20
55498--55547
26
2.0
26
84
4
66
50
4
0
46
1.20

Tables:   1

The End!