Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003978.1 Hibiscus syriacus cultivar Beakdansim tig00008642_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46783

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5146--5192
8
5.9
8
92
0
67
51
12
0
36
1.40
5145--5193
12
4.1
12
86
0
62
48
12
0
38
1.41
6989--7014
2
13.0
2
100
0
52
50
0
0
50
1.00
7952--7988
20
1.9
19
89
10
58
24
16
5
54
1.63
11251--11311
27
2.3
27
97
0
113
31
14
22
31
1.94
11688--11734
24
2.0
24
83
8
60
21
19
17
42
1.89
11697--11753
24
2.4
23
77
13
62
22
14
19
43
1.86
17021--17105
44
1.9
44
100
0
170
30
17
21
30
1.96
21476--21522
21
2.2
21
84
0
58
6
38
8
46
1.60
22997--23024
2
14.0
2
100
0
56
50
0
0
50
1.00
24117--24159
11
3.6
12
81
9
52
32
2
2
62
1.20
24111--24144
17
1.9
18
94
5
61
32
0
2
64
1.08
25586--25641
14
4.3
14
76
17
66
10
12
23
53
1.69
25593--25662
24
2.9
24
87
4
97
12
10
18
58
1.62
26388--26462
10
7.7
10
69
21
61
10
12
20
57
1.64
26394--26466
16
4.7
16
88
3
96
10
10
19
58
1.61
26394--26458
32
2.0
32
93
0
112
9
12
21
56
1.63
26528--26560
16
2.1
16
100
0
66
6
12
24
57
1.57
31257--31355
39
2.5
39
88
3
135
20
34
26
19
1.96
43907--43984
15
5.2
15
82
0
93
34
5
20
39
1.75
45713--45778
29
2.4
27
80
12
73
34
18
21
25
1.96

Tables:   1

The End!