Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003982.1 Hibiscus syriacus cultivar Beakdansim tig00008653_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70727

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1593--1626
16
2.1
16
88
5
50
55
0
5
38
1.24
19202--19284
31
2.9
28
78
10
87
39
12
9
38
1.75
19210--19284
28
2.5
30
79
10
75
42
13
9
34
1.76
25566--25630
21
3.1
21
86
0
85
21
16
32
29
1.96
35441--35476
18
2.0
18
88
0
54
19
36
19
25
1.95
38385--38454
34
2.1
32
89
5
104
21
31
15
31
1.95
38669--38708
21
1.9
22
90
10
66
15
10
37
37
1.80
38737--38779
21
2.0
21
95
0
77
27
27
20
23
1.99
38815--38857
21
2.0
21
100
0
86
13
27
44
13
1.83
38891--38970
21
4.0
21
76
20
91
12
27
37
22
1.90
38914--38943
15
2.0
15
100
0
60
13
26
33
26
1.93
38892--38964
37
2.0
37
91
2
121
13
27
35
23
1.92
39060--39119
29
2.0
31
90
6
97
41
18
6
33
1.76
40387--40434
19
2.5
20
82
3
62
29
12
6
52
1.63
41625--41667
21
2.0
21
95
0
77
27
27
20
23
1.99
41703--41746
21
2.1
21
100
0
88
13
27
45
13
1.81
41780--41859
21
4.0
21
72
20
73
13
27
35
23
1.93
41804--41832
15
1.9
15
100
0
58
17
27
27
27
1.97
41782--41853
37
2.0
37
88
2
110
15
27
31
25
1.95
41949--42008
29
2.0
31
90
6
97
41
18
6
33
1.76
45259--45338
29
2.8
29
82
14
103
45
6
1
47
1.36
45294--45376
42
2.1
38
86
13
114
40
7
2
49
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45294--45376
40
2.1
40
84
13
109
40
7
2
49
1.43
45380--45420
17
2.4
17
91
0
64
46
9
0
43
1.36
49096--49130
14
2.5
14
100
0
70
28
28
22
20
1.98
49684--49710
14
1.9
14
100
0
54
40
0
0
59
0.98
52299--52339
21
2.0
21
95
0
73
41
17
0
41
1.49
60498--60581
3
27.3
3
90
4
132
36
0
0
63
0.95
63522--63563
8
5.5
8
97
2
70
42
0
0
57
0.99
63522--63564
15
2.8
15
85
3
59
41
0
0
58
0.98
63584--63609
11
2.4
11
100
0
52
34
0
0
65
0.93
66332--66365
18
1.9
17
88
5
50
5
8
5
79
1.05
66358--66382
11
2.3
11
100
0
50
0
16
0
84
0.63

Tables:   1

The End!