Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003984.1 Hibiscus syriacus cultivar Beakdansim tig00008665_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71118

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5905--5967
21
3.0
20
73
8
54
31
7
19
41
1.80
6054--6117
21
3.0
21
88
0
92
34
17
14
34
1.89
8148--8206
29
2.0
29
100
0
118
49
13
13
23
1.78
12828--12886
29
2.0
29
100
0
118
49
13
13
23
1.78
13240--13298
29
2.0
29
100
0
118
23
13
13
49
1.78
17922--17982
29
2.0
30
93
6
106
22
14
13
49
1.78
20062--20133
3
24.0
3
100
0
144
66
0
0
33
0.92
25128--25169
14
3.0
14
85
0
57
28
9
26
35
1.88
31334--31559
118
1.9
117
92
2
382
38
10
15
34
1.83
32617--32658
20
2.1
20
100
0
84
38
19
4
38
1.73
44681--44705
6
4.2
6
100
0
50
0
16
48
36
1.46
45390--45446
12
4.8
12
89
4
80
38
29
1
29
1.67
45384--45446
24
2.6
24
85
9
92
38
30
1
30
1.67
45390--45457
24
2.8
24
86
4
75
35
33
1
29
1.67
46760--46815
10
5.7
10
71
12
53
21
1
3
73
1.08
53021--53046
11
2.4
11
100
0
52
61
0
0
38
0.96
53627--53661
15
2.3
15
90
9
54
31
0
5
62
1.18
54548--54608
31
2.0
31
90
0
95
37
19
18
24
1.94
60007--60032
12
2.2
12
100
0
52
34
7
15
42
1.75

Tables:   1

The End!