Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003989.1 Hibiscus syriacus cultivar Beakdansim tig00008679_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55896

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
796--833
18
2.2
17
86
13
51
76
2
2
18
1.02
1068--1222
20
7.8
20
73
8
118
22
18
19
40
1.92
1088--1203
60
1.9
61
85
5
164
22
17
19
40
1.91
1098--1227
60
2.2
60
83
5
156
23
16
18
41
1.89
1098--1242
20
7.3
19
73
12
87
23
15
19
41
1.90
1151--1242
40
2.3
40
81
5
98
21
16
20
41
1.90
1260--1313
20
2.7
19
75
8
63
24
14
33
27
1.94
2168--2213
24
2.0
23
83
12
58
4
10
8
76
1.15
2763--2822
3
21.0
3
80
10
72
28
3
1
66
1.17
6273--6334
32
2.0
32
93
3
108
14
16
9
59
1.60
8466--8503
11
3.3
12
85
7
53
68
10
15
5
1.36
10268--10385
36
3.3
36
82
8
150
34
16
12
36
1.86
10268--10402
71
1.9
72
83
4
175
33
19
14
33
1.91
10488--10569
36
2.3
36
78
4
94
36
19
12
31
1.89
10543--10781
105
2.3
102
83
9
290
30
20
11
37
1.88
10743--10846
36
3.0
35
80
6
115
32
20
11
35
1.88
10376--11008
273
2.3
270
84
5
787
31
17
11
38
1.86
11160--11257
29
3.5
29
86
5
139
26
11
15
46
1.79
11146--11269
29
4.4
28
83
8
137
25
10
15
48
1.77
11266--11366
52
2.0
53
90
5
163
32
12
18
35
1.89
11354--11417
30
2.1
30
91
5
103
35
10
14
39
1.81
11370--11527
64
2.4
65
80
8
160
30
12
12
44
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11572--11786
119
1.8
117
80
11
260
32
13
11
43
1.78
12371--12432
28
2.2
28
91
0
97
24
9
12
53
1.69
12371--12452
28
2.9
28
85
3
94
24
10
13
51
1.73
12481--12675
40
4.7
40
73
15
153
25
32
18
24
1.97
12481--12926
134
3.4
129
87
5
592
25
29
18
26
1.98
13139--13192
3
19.0
3
77
11
60
27
3
1
66
1.19
13133--13192
32
1.9
31
93
3
102
26
5
3
65
1.29
27263--27304
22
1.9
22
85
9
59
40
0
4
54
1.21
28555--28587
3
11.0
3
100
0
66
33
0
0
66
0.92
29683--29980
151
2.0
151
80
6
336
45
7
19
27
1.76
36893--36917
10
2.5
10
100
0
50
16
0
0
84
0.63
44740--44785
25
1.9
25
86
8
69
41
4
17
36
1.69
47237--47308
30
2.4
30
95
0
126
30
23
20
25
1.99
47292--47419
31
4.1
30
78
13
116
30
18
21
29
1.97
48696--48739
21
2.1
21
86
0
61
15
27
27
29
1.96

Tables:   1

The End!