Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003995.1 Hibiscus syriacus cultivar Beakdansim tig00008705_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73388

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
374--448
39
1.9
39
88
0
114
29
6
17
46
1.73
4862--4944
41
2.0
41
97
0
157
43
19
13
24
1.86
13042--13080
18
2.2
18
90
4
62
25
2
0
71
0.98
14068--14195
31
4.1
31
78
6
141
32
21
18
28
1.97
14069--14192
63
2.0
62
87
4
178
30
20
19
29
1.97
14297--14354
30
1.9
31
85
3
82
32
18
5
43
1.73
14471--14495
2
12.5
2
100
0
50
52
0
0
48
1.00
18333--18461
31
4.1
31
75
5
116
34
18
17
30
1.94
18369--18460
33
2.8
33
72
15
84
33
16
16
33
1.91
18987--19015
2
15.0
2
92
7
51
48
0
0
51
1.00
19535--19688
64
2.4
63
78
11
161
27
22
18
31
1.97
28912--28945
17
2.1
16
88
5
50
76
0
8
14
1.01
29420--29467
25
1.9
25
83
8
62
58
12
2
27
1.46
32760--32803
20
2.2
20
84
4
63
65
0
15
18
1.27
37724--37757
17
2.1
16
88
5
50
76
0
8
14
1.01
38232--38278
24
2.0
24
83
8
60
57
12
2
27
1.47
42168--42203
18
2.1
16
90
10
54
47
0
2
50
1.15
51033--51161
63
2.0
63
92
0
213
16
19
18
45
1.85
53599--53681
28
2.8
30
80
9
107
43
8
1
46
1.41
54288--54315
2
14.0
2
100
0
56
50
0
0
50
1.00
54939--54976
6
6.3
6
90
0
58
18
5
34
42
1.73
54939--54976
12
3.2
12
96
0
67
18
5
34
42
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65391--65483
47
2.0
46
87
6
134
40
13
21
23
1.89

Tables:   1

The End!