Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000401.1 Hibiscus syriacus cultivar Beakdansim tig00000737_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58594

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7428--7469
21
2.0
21
85
0
57
21
40
26
11
1.88
8176--8218
19
2.3
19
100
0
86
18
44
9
27
1.80
9762--9828
5
12.6
5
83
13
73
80
1
17
0
0.79
9762--9829
11
6.3
11
83
11
79
80
1
17
0
0.78
9762--9857
16
5.8
16
83
11
106
79
1
18
1
0.86
9766--9866
27
3.8
26
76
15
93
79
0
17
1
0.89
9763--9830
12
5.8
11
79
16
50
80
1
17
0
0.78
9762--9868
7
14.4
7
75
20
69
79
0
17
1
0.88
11087--11482
42
9.0
42
72
13
287
28
21
20
29
1.98
11092--11482
89
4.4
89
88
2
527
28
21
20
29
1.98
11084--11482
177
2.2
178
88
3
590
28
21
20
29
1.98
11451--11700
111
2.3
111
89
1
376
31
26
14
27
1.95
11887--11971
3
28.7
3
89
9
122
30
1
1
67
1.06
14783--14819
19
1.9
19
100
0
74
35
16
16
32
1.91
18988--19029
17
2.4
18
88
4
59
21
7
0
71
1.09
22032--22187
65
2.4
65
87
3
208
30
19
22
28
1.98
28247--28406
79
2.0
79
100
0
320
48
15
7
28
1.71
28770--28991
117
1.9
117
82
3
277
29
13
7
49
1.70
29417--29569
65
2.4
66
83
7
181
32
18
20
28
1.96
29434--29569
65
2.1
64
86
4
184
31
18
21
28
1.97
33495--33716
42
5.2
42
65
12
128
30
23
24
21
1.99
33423--33720
86
3.5
86
86
2
368
29
23
23
23
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33562--33696
44
3.1
43
66
16
107
30
25
22
22
1.99
34498--34541
18
2.4
18
92
0
70
20
6
0
72
1.07
34646--34688
6
7.7
6
94
5
65
16
0
0
83
0.64
34610--34688
5
14.8
5
77
12
61
17
5
1
75
1.04
34625--34688
18
3.8
17
74
16
53
17
6
0
76
0.98
35770--35856
41
2.2
40
81
4
95
41
0
21
36
1.54
36979--37029
21
2.4
21
90
0
75
41
11
15
31
1.83
40364--40388
12
2.1
12
100
0
50
44
0
0
56
0.99

Tables:   1

The End!