Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004012.1 Hibiscus syriacus cultivar Beakdansim tig00008750_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55624

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7857--8156
7
47.3
6
78
13
152
74
0
17
8
1.08
7851--7916
5
12.8
5
75
22
57
78
0
18
3
0.87
7856--7918
16
3.7
17
77
12
67
79
0
19
1
0.82
7888--8066
7
26.7
7
87
9
227
72
0
15
11
1.15
7851--7944
25
3.6
27
81
15
99
76
0
17
6
0.98
8055--8126
9
8.3
9
93
1
51
77
0
22
0
0.76
7914--8066
7
22.7
7
91
6
230
71
0
14
13
1.18
8055--8133
16
4.1
18
72
20
54
77
0
21
1
0.84
8153--8238
45
1.9
45
88
4
129
41
16
29
12
1.85
9529--9673
55
2.6
55
86
2
193
27
18
26
26
1.98
9566--9689
55
2.3
55
90
2
196
25
19
25
29
1.98
10774--10829
16
3.6
15
80
7
67
28
0
14
57
1.38
11109--11146
18
2.2
18
86
13
53
31
0
2
65
1.06
11987--12034
24
2.0
24
84
4
62
33
0
4
62
1.14
16474--16512
17
2.3
17
90
0
60
35
10
43
10
1.73
26148--26722
112
5.1
112
95
0
1015
44
14
15
25
1.84
26593--27046
182
2.5
183
92
1
732
42
13
16
27
1.85
27237--27599
181
2.0
181
98
0
708
39
16
13
30
1.87
27655--27702
23
2.1
23
88
0
69
39
16
8
35
1.79
52556--52720
88
1.9
84
84
9
217
28
11
20
39
1.87

Tables:   1

The End!