Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004023.1 Hibiscus syriacus cultivar Beakdansim tig00008784_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54933

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2877--2915
20
2.0
20
100
0
78
35
20
20
23
1.96
3602--3659
23
2.5
23
97
0
107
51
15
0
32
1.44
16014--16058
14
3.2
14
77
0
54
15
13
13
57
1.65
16241--16294
24
2.2
24
86
0
72
11
14
12
61
1.58
17067--17105
13
2.9
14
81
18
55
48
2
0
48
1.15
17052--17097
22
2.0
24
83
12
60
54
0
0
45
0.99
19997--20057
23
2.7
23
84
0
86
26
29
26
18
1.98
20073--20393
103
3.1
103
97
0
597
36
23
13
26
1.92
28736--28791
20
2.8
20
77
0
67
19
16
19
44
1.87
29855--29919
6
11.2
6
98
1
116
0
16
47
35
1.47
32690--32740
26
2.0
26
100
0
102
19
29
7
43
1.79
34186--34218
14
2.4
14
100
0
66
33
9
30
27
1.88
34322--34356
3
11.3
3
93
6
61
34
0
0
65
0.93
37585--37625
20
2.0
21
86
13
59
41
0
0
58
0.98
44875--44913
16
2.5
15
84
15
53
41
7
10
41
1.68

Tables:   1

The End!