Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004024.1 Hibiscus syriacus cultivar Beakdansim tig00008788_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49818

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2792--2823
16
2.0
16
93
0
55
65
0
3
31
1.08
7360--7401
15
2.7
15
92
3
66
4
4
23
66
1.30
7515--7591
2
38.5
2
100
0
154
49
0
0
50
1.00
13339--13366
14
2.0
14
100
0
56
14
0
50
35
1.43
23419--23456
2
19.0
2
100
0
76
50
0
0
50
1.00
36912--36953
8
5.2
8
94
5
68
88
0
2
9
0.61
37962--38442
55
8.8
55
87
2
603
30
15
26
27
1.96
38349--38506
55
2.9
54
84
6
196
31
20
23
24
1.98
41480--41514
16
2.1
17
89
10
54
25
22
17
34
1.96
43986--44048
2
32.0
2
84
9
85
46
0
3
50
1.17
43986--44044
15
3.8
15
86
10
66
45
0
3
50
1.18
46132--46179
19
2.4
19
82
6
60
56
0
0
43
0.99
48837--48888
21
2.5
20
82
14
61
42
0
3
53
1.19

Tables:   1

The End!