Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004039.1 Hibiscus syriacus cultivar Beakdansim tig00008823_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60414

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2787--2828
17
2.5
17
88
3
59
50
4
4
40
1.45
13818--13909
31
3.0
31
88
0
130
40
9
5
44
1.60
13900--13939
21
1.9
21
89
0
62
60
5
10
25
1.49
24519--24556
16
2.3
17
90
9
69
71
0
0
28
0.87
24520--24564
16
2.7
16
89
6
54
71
2
0
26
0.98
27004--27074
29
2.4
29
100
0
142
30
19
16
32
1.95
29933--29967
17
1.9
19
88
11
56
31
8
34
25
1.86
44209--44268
23
2.7
22
84
5
77
55
0
3
41
1.16
44381--44420
21
1.9
21
89
0
62
12
47
12
27
1.77
44380--44426
21
2.2
21
80
0
58
12
44
10
31
1.77
46450--46483
15
2.3
15
94
0
59
8
20
64
5
1.43
46704--46739
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!