Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004042.1 Hibiscus syriacus cultivar Beakdansim tig00008831_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69404

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8745--9036
12
25.2
12
73
20
159
74
0
16
8
1.08
8766--9035
6
44.5
6
76
16
134
75
0
15
8
1.06
8767--9025
19
14.9
17
72
19
80
74
0
16
8
1.07
8766--9030
7
37.3
7
76
16
86
75
0
15
8
1.06
8759--9019
51
5.4
50
78
15
207
74
0
16
8
1.09
8822--8956
57
2.4
57
89
9
197
70
0
14
14
1.22
8972--9002
16
1.9
16
100
0
62
70
0
29
0
0.87
10397--10541
55
2.6
55
86
2
193
27
18
26
26
1.98
10434--10557
55
2.3
55
90
2
196
25
19
25
29
1.98
11629--11684
16
3.6
15
80
7
67
28
0
14
57
1.38
17334--17372
17
2.3
17
90
0
60
35
10
43
10
1.73
22130--22199
36
1.9
36
85
5
97
51
5
4
38
1.45
26998--27570
112
5.1
112
95
0
988
44
14
15
25
1.84
27441--27889
179
2.5
180
91
1
702
42
14
15
27
1.86
33360--33392
16
2.0
17
88
5
50
63
0
0
36
0.95
36536--36703
88
1.9
87
85
6
232
28
11
20
39
1.87
46232--46325
21
4.4
21
73
9
75
35
14
11
38
1.83
48098--48158
31
2.0
31
86
0
86
37
13
19
29
1.90
49330--49368
19
2.1
19
100
0
78
25
12
15
46
1.81

Tables:   1

The End!