Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004044.1 Hibiscus syriacus cultivar Beakdansim tig00008834_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70963

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12606--12647
22
2.0
21
85
4
57
47
4
0
47
1.23
14737--14793
29
1.9
30
85
3
80
52
0
8
38
1.33
19193--19236
16
2.7
17
75
10
56
65
0
0
34
0.93
20729--20789
32
2.0
31
84
12
81
31
22
16
29
1.96
23335--23424
38
2.4
37
85
5
117
14
10
37
37
1.80
23347--23424
38
2.0
39
90
2
122
14
10
34
41
1.79
23991--24035
18
2.6
18
82
13
58
31
22
8
37
1.85
25684--25711
12
2.3
12
100
0
56
71
0
0
28
0.86
26504--26543
21
1.9
21
89
0
62
60
0
0
40
0.97
33906--33932
3
9.0
3
100
0
54
66
0
0
33
0.92
37166--37212
23
2.0
25
84
16
64
55
4
4
36
1.39
39109--39242
67
2.0
67
100
0
268
28
23
16
31
1.96
43780--43815
2
18.0
2
100
0
72
50
0
0
50
1.00
44396--44465
35
2.0
35
100
0
140
25
8
22
42
1.82
51886--52030
75
1.9
75
81
2
175
43
9
17
29
1.81
53092--53121
5
6.0
5
100
0
60
40
20
40
0
1.52
58111--58194
31
2.7
31
79
1
87
27
32
27
13
1.93
62178--62253
3
25.3
3
100
0
152
67
0
32
0
0.91

Tables:   1

The End!