Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004047.1 Hibiscus syriacus cultivar Beakdansim tig00008842_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53746

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17790--17817
6
4.7
6
100
0
56
82
0
0
17
0.68
22381--22467
16
5.6
16
80
9
99
54
2
2
41
1.26
22381--22488
15
7.1
15
77
13
96
55
2
1
39
1.25
22381--22469
31
2.9
31
80
11
110
55
2
2
40
1.25
22454--22497
23
1.9
23
81
9
54
65
2
0
31
1.05
26563--26595
16
2.0
17
88
5
50
36
9
12
42
1.74
26751--26860
24
4.5
24
77
4
103
26
7
16
50
1.71
26820--26846
14
1.9
14
100
0
54
37
3
14
44
1.63
26794--26872
38
2.1
38
82
0
95
26
7
15
50
1.70
30335--30387
17
3.2
17
83
5
72
45
0
0
54
0.99
31217--31254
18
2.1
18
95
0
67
31
13
5
50
1.63
37504--37556
21
2.3
23
78
18
58
35
9
1
52
1.45
42518--42544
3
9.0
3
100
0
54
33
0
0
66
0.92
50452--50480
14
2.0
15
93
6
51
27
31
27
13
1.94
52747--52776
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!