Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000405.1 Hibiscus syriacus cultivar Beakdansim tig00000746_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95195

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
411--455
21
2.1
21
87
0
63
15
24
28
31
1.96
3605--3684
22
3.6
22
94
3
135
25
30
27
17
1.97
5365--5409
21
2.1
21
87
0
63
15
24
28
31
1.96
10470--10522
21
2.5
21
81
6
72
20
24
18
35
1.95
10512--10569
21
2.8
21
81
5
73
39
15
20
24
1.91
10549--10627
21
3.8
21
88
1
115
44
22
15
17
1.86
10552--10687
20
6.7
20
86
1
101
36
24
16
22
1.95
11233--11288
20
2.8
20
94
0
94
41
23
21
14
1.89
11312--11365
14
3.5
14
75
22
54
11
22
20
46
1.82
11294--11364
33
2.2
33
81
0
79
19
21
21
38
1.94
12923--13014
42
2.2
42
88
1
141
20
15
42
21
1.89
12950--13010
21
2.9
21
73
9
70
21
13
42
22
1.87
13351--13403
20
2.7
20
87
0
70
35
28
11
24
1.90
13357--13443
20
4.4
19
81
7
84
37
26
19
16
1.92
13432--13488
14
3.7
14
70
20
51
50
22
14
12
1.75
13416--13495
33
2.4
33
93
0
142
47
22
17
12
1.81
13502--13598
19
5.6
19
71
22
97
12
19
21
46
1.83
13524--13582
14
3.9
14
76
20
64
10
16
23
49
1.77
13507--13598
33
2.8
33
98
0
175
11
18
21
47
1.80
13583--13626
20
2.2
20
84
4
54
18
22
20
38
1.93
13592--13637
20
2.3
20
92
0
74
15
19
26
39
1.91
15527--15585
20
3.0
20
87
0
73
44
22
18
15
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15834--15877
22
2.0
22
95
0
79
18
15
45
20
1.85
16064--16134
20
3.5
20
92
0
115
25
19
26
28
1.99
16044--16181
41
3.4
41
78
9
138
24
17
23
34
1.96
16064--16178
20
5.7
20
79
6
106
25
18
24
32
1.97
16104--16199
41
2.3
41
82
3
113
20
20
22
35
1.96
16208--16260
21
2.5
22
81
6
74
33
18
26
20
1.96
21116--21333
47
4.6
47
75
4
161
30
18
13
37
1.90
21432--21479
14
3.5
13
77
8
51
25
0
4
70
1.04
28124--28162
3
13.0
3
88
0
60
38
0
61
0
0.96
28124--28190
15
4.3
15
82
5
71
41
0
55
2
1.15
30782--31236
240
1.9
240
99
0
901
31
15
22
30
1.95
35527--35855
66
5.0
66
96
0
577
20
27
6
45
1.76
38347--38397
25
2.0
25
88
7
77
50
0
5
43
1.26
39338--39400
29
2.1
31
91
5
103
47
22
3
26
1.66
40105--40135
15
2.1
15
93
0
53
54
0
0
45
0.99
46221--46309
32
2.8
32
77
3
90
25
19
20
34
1.96
46700--47716
8
127.1
8
97
0
1674
24
3
25
46
1.69
48094--48123
11
2.9
10
90
9
51
33
0
0
66
0.92
51668--51692
2
12.5
2
100
0
50
48
0
0
52
1.00
53787--53923
72
1.9
71
86
4
195
40
6
5
46
1.54
53891--53915
12
2.1
12
100
0
50
48
0
0
52
1.00
54096--54135
17
2.4
17
91
0
62
32
22
12
32
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60138--60212
37
2.0
37
94
0
132
29
18
25
26
1.98
60339--60369
12
2.6
12
89
0
53
16
22
6
54
1.64
60485--60517
16
2.1
16
94
0
57
36
0
0
63
0.95
61709--61774
31
2.1
33
88
5
100
39
21
13
25
1.90
66323--66421
33
3.1
33
92
2
157
38
23
14
24
1.91
70522--70548
9
3.0
9
100
0
54
55
22
11
11
1.66
71850--71923
31
2.4
31
81
4
87
16
28
29
25
1.97
73368--73437
36
1.9
36
85
5
97
48
8
1
41
1.42
80960--81550
199
3.0
197
88
3
843
29
17
18
34
1.94

Tables:   1

The End!