Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004052.1 Hibiscus syriacus cultivar Beakdansim tig00008864_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63989

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7089--7252
88
1.9
88
96
0
301
31
15
19
32
1.93
13984--14017
17
1.9
18
88
5
52
50
0
8
41
1.34
14928--14966
2
19.5
2
94
0
69
48
2
0
48
1.15
16416--16469
20
2.8
19
76
20
58
35
0
29
35
1.58
17386--17448
27
2.3
26
76
12
65
47
3
14
34
1.60
25901--25942
20
2.2
18
87
8
57
69
4
0
26
1.08
46274--46317
12
3.8
12
78
6
54
29
4
20
45
1.71
46275--46305
16
1.9
16
93
0
53
29
3
19
48
1.64
46274--46318
23
1.9
24
95
4
83
28
4
20
46
1.69
47263--47300
19
2.0
19
85
10
51
44
0
5
50
1.24
53256--53394
72
1.9
72
89
0
215
15
20
28
35
1.93
62356--62441
32
2.7
31
80
3
100
43
17
9
30
1.80

Tables:   1

The End!