Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004065.1 Hibiscus syriacus cultivar Beakdansim tig00008888_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82658

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13378--13498
17
6.9
17
70
20
72
71
1
19
7
1.17
13378--13446
18
3.9
18
72
9
61
73
2
15
7
1.17
13414--13468
23
2.4
22
80
17
58
72
1
18
7
1.16
13381--13476
6
16.3
6
72
7
54
73
2
17
6
1.13
17408--17525
48
2.6
44
81
12
139
39
8
19
32
1.82
18354--18384
15
2.1
15
93
0
53
35
9
0
54
1.33
20360--20412
21
2.5
21
96
0
97
33
15
13
37
1.86
23158--23262
37
2.8
37
85
0
138
40
15
13
31
1.85
23796--23827
2
16.5
2
93
6
57
46
0
0
53
1.00
24027--24064
2
19.5
2
94
5
69
47
0
0
52
1.00
28795--28836
8
5.1
8
85
2
57
80
4
14
0
0.86
29675--29735
24
2.5
24
91
0
95
37
18
1
42
1.60
30400--30475
36
2.1
37
90
7
120
25
25
14
35
1.93
30637--30708
37
1.9
37
82
0
90
26
19
12
41
1.87
31241--31361
43
2.8
43
94
0
206
28
31
16
23
1.96
31370--31989
106
6.0
105
82
7
752
34
23
19
22
1.96
31371--31968
207
2.9
206
85
4
769
34
23
18
22
1.96
33293--33493
2
103.5
2
85
9
220
41
1
1
54
1.23
33700--33757
28
2.1
27
81
9
64
31
3
0
65
1.09
49806--49968
55
3.0
55
85
2
204
30
16
16
36
1.91
49935--50003
36
1.9
36
93
0
120
23
13
24
39
1.90
57034--57072
18
2.0
19
85
14
53
56
20
7
15
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58497--58526
12
2.5
12
94
0
51
30
0
23
46
1.52
59583--59649
30
2.2
31
84
5
84
41
14
22
20
1.89
61550--61636
13
6.7
13
82
15
117
24
10
16
49
1.76
61539--61636
39
2.5
39
87
9
130
24
12
14
48
1.77
61550--61636
26
3.3
26
90
6
133
24
10
16
49
1.76
62305--62358
16
3.3
17
80
15
69
20
7
16
55
1.65
63072--63123
26
2.0
26
100
0
104
34
26
7
30
1.85
63652--63697
23
2.0
23
91
0
74
15
23
34
26
1.94
63761--63832
29
2.4
29
80
11
76
33
6
26
33
1.83
68984--69033
21
2.4
21
86
6
66
58
0
6
36
1.23
69744--69832
2
44.5
2
97
0
169
49
0
1
49
1.08
72608--72653
2
23.0
2
100
0
92
50
0
0
50
1.00

Tables:   1

The End!