Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004067.1 Hibiscus syriacus cultivar Beakdansim tig00008907_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55970

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1588--1657
31
2.3
31
82
5
79
28
24
11
35
1.90
1604--1663
31
1.9
31
93
0
102
25
23
15
36
1.93
3069--3135
31
2.2
31
86
0
89
29
25
10
34
1.89
3077--3142
31
2.1
31
94
0
114
22
27
13
36
1.92
8598--8622
2
12.5
2
100
0
50
0
0
48
52
1.00
11863--11910
23
2.1
23
88
0
69
20
27
22
29
1.99
12133--12182
3
17.0
3
95
4
93
34
0
0
66
0.92
18390--18457
23
3.0
23
77
0
73
22
22
25
30
1.99
37042--37441
105
3.8
104
92
2
638
38
17
22
21
1.93
37042--37441
209
1.9
211
92
2
669
38
17
22
21
1.93
37384--37865
136
3.5
135
82
6
517
36
16
21
25
1.94
39443--39496
24
2.2
25
83
3
65
31
1
5
61
1.30
52984--53042
29
2.0
29
100
0
118
27
16
20
35
1.94
54818--54898
29
2.8
29
92
3
128
17
23
17
41
1.89
55266--55413
62
2.4
62
76
10
151
28
18
18
34
1.95

Tables:   1

The End!