Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004069.1 Hibiscus syriacus cultivar Beakdansim tig00008910_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56427

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2356--2657
136
2.2
137
81
6
340
27
18
30
23
1.98
8216--8275
32
2.0
30
87
9
86
48
3
0
48
1.18
8807--8963
79
2.0
79
100
0
314
28
34
15
22
1.94
22561--22612
18
3.1
17
78
8
54
46
5
3
44
1.45
26245--26348
32
3.3
32
81
9
117
25
44
15
14
1.84
26303--26385
29
2.9
29
83
0
94
20
37
25
16
1.93
26638--26687
26
1.9
26
95
0
91
48
8
36
8
1.62
26694--26740
14
3.5
13
77
11
51
57
0
40
2
1.11
26842--26882
22
1.9
21
85
5
55
26
0
19
53
1.45
27183--27229
16
3.0
16
84
9
53
29
0
10
59
1.31
27204--27234
15
2.1
14
94
5
53
38
0
6
54
1.26
29445--29492
14
3.6
14
81
16
66
47
16
0
35
1.47
29444--29492
25
2.0
25
95
0
89
46
16
0
36
1.47
29574--29778
21
10.2
21
64
21
64
45
12
0
41
1.42
29460--30112
120
5.6
119
78
12
705
45
11
1
41
1.49
29460--29778
60
5.3
60
95
0
584
46
11
0
41
1.41
29845--29892
14
3.6
14
78
16
57
50
14
0
35
1.44
29844--29892
25
2.0
25
91
0
80
48
14
0
36
1.44
29860--30112
60
4.2
60
90
1
393
46
11
0
42
1.39
30114--30147
10
3.4
10
83
0
50
55
8
2
32
1.45
30955--31013
16
3.4
16
72
17
55
50
11
0
37
1.39
31289--31350
28
2.1
30
91
5
101
56
12
0
30
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31775--31818
23
1.9
23
100
0
88
27
27
22
22
1.99
31837--31896
22
2.7
22
92
0
93
21
11
36
30
1.89
31905--32016
29
3.9
29
89
0
170
16
25
39
19
1.91
31905--32016
58
1.9
58
94
0
197
16
25
39
19
1.91
31999--32077
33
2.4
33
95
2
142
10
15
48
26
1.76
36409--36436
14
2.0
14
100
0
56
35
21
21
21
1.96
37082--37198
32
3.8
30
85
10
139
34
23
16
25
1.95
37113--37206
32
2.9
32
95
0
161
35
25
14
24
1.94
39913--39968
24
2.3
24
96
0
103
26
17
17
37
1.93
47368--47530
87
1.9
87
92
0
272
42
10
12
34
1.78
47666--48549
182
4.9
182
93
1
1508
28
17
12
41
1.85
50212--50561
185
1.9
185
93
1
605
34
16
13
36
1.87
51845--51901
3
19.0
3
85
0
78
26
33
3
36
1.74
51849--51918
12
5.8
12
91
0
86
22
32
5
38
1.78
53428--54014
200
2.9
200
97
0
1113
31
18
14
35
1.91
54249--54297
19
2.6
19
93
6
82
57
10
2
30
1.43
55847--55899
15
3.5
15
76
23
65
5
41
0
52
1.25
55837--55916
31
2.5
32
89
6
126
5
43
0
51
1.23

Tables:   1

The End!