Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004071.1 Hibiscus syriacus cultivar Beakdansim tig00008916_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83178

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13171--13256
42
2.0
42
97
0
163
25
17
29
27
1.97
20420--20466
23
2.0
23
92
8
78
63
2
0
34
1.06
21387--21524
60
2.3
59
81
7
161
31
15
19
34
1.93
21598--21653
2
29.5
2
78
10
64
46
1
0
51
1.11
22603--22728
63
2.0
63
93
0
216
23
22
17
36
1.95
34660--35313
105
6.2
105
91
1
994
33
26
18
22
1.96
35660--35710
2
26.5
2
80
7
61
45
1
0
52
1.12
36663--36788
63
2.0
63
93
0
216
23
22
17
36
1.95
37014--37052
15
2.4
16
83
12
53
12
5
5
76
1.11
37062--37123
30
2.0
31
84
3
81
20
9
0
69
1.16
37287--37325
2
19.5
2
83
0
51
43
2
5
48
1.38
37287--37363
12
6.8
12
75
16
58
36
3
6
53
1.45
43619--43648
2
15.0
2
100
0
60
50
0
0
50
1.00
51742--51809
30
2.3
30
86
0
91
47
2
10
39
1.53
52086--52128
19
2.3
19
84
8
52
53
0
2
44
1.13
58272--58350
39
2.0
39
100
0
158
31
15
20
32
1.93
59078--59107
11
2.7
11
94
0
51
46
6
16
30
1.73
61537--61596
28
2.2
27
79
5
66
51
0
1
46
1.10
65337--65500
88
1.9
88
96
0
301
31
15
19
32
1.93
73175--73211
2
18.5
2
94
0
65
48
2
0
48
1.15

Tables:   1

The End!