Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004074.1 Hibiscus syriacus cultivar Beakdansim tig00008919_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59977

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
234--429
6
32.7
6
87
7
247
53
0
46
0
1.00
7216--7268
24
2.2
24
100
0
106
30
16
33
18
1.94
15300--15336
19
1.9
19
89
10
58
27
21
29
21
1.99
28925--29080
31
5.0
31
91
1
233
35
21
21
21
1.96
29485--29525
18
2.4
18
88
8
59
41
17
4
36
1.71
29879--29923
21
2.1
21
87
0
63
15
24
28
31
1.96
32971--33112
31
4.6
31
89
1
205
35
21
21
21
1.96
33913--33957
21
2.1
21
87
0
63
15
24
28
31
1.96
39965--39989
12
2.1
12
100
0
50
40
24
16
20
1.91
42197--42255
29
2.0
29
100
0
118
23
13
13
49
1.78
54579--54611
15
2.1
17
88
11
52
39
15
0
45
1.46
58064--58112
18
2.7
18
87
3
71
18
0
10
71
1.13
58457--58515
30
2.0
30
100
0
118
37
11
10
40
1.76
58517--58875
181
2.0
179
87
3
517
28
17
12
42
1.85

Tables:   1

The End!