Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004075.1 Hibiscus syriacus cultivar Beakdansim tig00008921_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45493

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1592--1628
19
1.9
19
89
10
58
48
0
8
43
1.32
1706--1748
22
1.9
23
85
4
61
62
4
0
32
1.15
13489--13612
60
2.1
60
89
3
187
38
4
20
36
1.74
13497--13639
60
2.4
60
82
6
173
37
4
23
34
1.76
15882--16026
76
1.9
76
89
0
227
42
8
12
37
1.73
16155--16285
41
3.1
41
63
25
101
38
5
21
35
1.76
16111--16286
85
2.1
85
100
0
352
38
4
20
36
1.73
16276--16429
60
2.6
60
83
4
202
37
4
21
36
1.74
16313--16410
29
3.3
29
69
17
85
40
4
18
36
1.70
16671--16804
72
1.9
71
86
7
191
33
13
8
44
1.75
17047--17351
77
4.0
77
83
3
348
33
17
11
38
1.85
17047--17351
154
2.0
153
83
5
391
33
17
11
38
1.85
31405--31458
24
2.2
24
96
0
99
25
5
22
46
1.73
31497--31554
29
2.0
29
96
0
107
31
29
13
25
1.94
32135--32218
42
2.0
42
95
0
150
26
8
25
40
1.83
44383--44443
32
1.9
32
83
9
81
49
4
0
45
1.23

Tables:   1

The End!