Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004085.1 Hibiscus syriacus cultivar Beakdansim tig00008936_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78693

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4133--4176
12
3.5
13
81
9
56
18
45
20
15
1.85
6310--6411
50
2.0
50
100
0
204
27
10
33
28
1.90
6540--6583
20
2.1
21
95
4
81
31
9
4
54
1.52
8172--8228
19
3.0
19
97
0
105
15
26
3
54
1.57
12239--12411
80
2.1
82
90
4
269
31
11
4
52
1.58
12470--12499
13
2.3
13
94
0
51
63
0
3
33
1.11
12589--12624
19
2.0
17
89
10
54
66
0
0
33
0.92
15401--16017
249
2.5
248
82
3
743
24
17
23
33
1.96
16210--16524
111
2.9
110
86
5
442
26
18
22
33
1.96
21808--21883
36
2.1
36
97
0
143
43
14
10
31
1.79
26803--26878
36
2.1
36
97
0
143
43
14
10
31
1.79
33461--33950
156
3.1
155
83
4
592
11
25
24
38
1.88
33461--34039
312
1.9
312
81
4
711
11
26
24
37
1.90
36029--36071
16
2.5
17
85
7
52
39
0
0
60
0.97
36105--36145
20
2.1
20
82
13
50
46
4
7
41
1.53
37641--37678
3
12.3
3
94
5
67
0
34
0
65
0.93
41546--41595
18
2.8
18
81
0
64
28
18
36
18
1.94
49040--49068
5
6.0
5
92
8
51
20
20
58
0
1.39
52180--52246
33
2.0
33
97
0
125
28
8
16
46
1.77
63914--63971
17
3.4
17
95
0
107
31
36
15
17
1.91

Tables:   1

The End!