Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004094.1 Hibiscus syriacus cultivar Beakdansim tig00008954_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53863

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1748--1839
48
1.9
48
93
4
159
22
22
26
28
1.99
2742--2802
32
1.9
32
86
0
86
22
16
16
44
1.86
4324--4370
23
2.0
24
91
4
78
44
0
21
34
1.52
4585--4740
31
5.0
31
91
1
242
20
20
22
36
1.95
6549--6665
47
2.4
47
80
8
137
52
26
0
19
1.51
7005--7295
151
1.9
150
96
0
537
20
30
13
35
1.91
14327--14374
21
2.3
22
79
17
57
52
0
47
0
1.00
18469--18524
15
3.6
15
79
9
67
44
10
12
32
1.77
18472--18522
17
3.1
17
80
11
61
45
9
9
35
1.71
18694--18746
21
2.5
21
93
0
88
28
28
22
20
1.99
22957--23021
32
2.0
32
93
0
112
47
9
18
24
1.77
29891--29935
23
2.0
23
86
0
63
60
8
2
28
1.39
30144--30179
6
5.7
6
90
9
54
63
2
2
30
1.22
30144--30179
13
2.8
12
88
12
54
63
2
2
30
1.22
33940--34700
200
3.8
199
80
6
731
34
20
9
35
1.86
43293--43321
2
14.5
2
100
0
58
48
0
0
51
1.00
43328--43367
19
2.2
19
86
4
55
57
10
5
27
1.52
48089--48120
15
2.2
15
94
5
57
37
9
28
25
1.87
51734--51923
97
2.0
97
96
0
353
46
16
11
26
1.80
52815--52861
2
24.0
2
95
4
87
51
0
0
48
1.00
53502--53561
2
30.0
2
93
0
102
51
1
0
46
1.10

Tables:   1

The End!