Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000411.1 Hibiscus syriacus cultivar Beakdansim tig00000757_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77773

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1987--2016
15
2.1
14
93
6
51
43
3
0
53
1.17
1987--2016
7
4.1
7
91
8
51
43
3
0
53
1.17
2229--2288
19
3.4
19
65
21
58
36
6
3
53
1.44
2221--2291
33
2.2
33
97
0
133
38
5
2
53
1.39
2805--2858
2
28.0
2
82
14
69
46
1
0
51
1.11
7314--7347
14
2.4
14
85
0
50
47
29
0
23
1.52
7308--7347
21
1.9
21
89
0
62
47
30
0
22
1.52
7526--7581
14
4.1
13
76
17
51
17
0
33
48
1.48
7525--7585
21
3.0
20
83
9
70
19
0
31
49
1.49
7830--7881
7
7.4
7
79
16
54
44
32
0
23
1.54
9197--9259
23
2.8
23
80
2
83
31
25
26
15
1.96
10222--10279
20
2.6
22
89
10
84
24
22
22
31
1.99
11193--11247
23
2.4
23
90
0
92
32
25
25
16
1.96
12206--12243
20
1.9
20
100
0
76
23
23
21
31
1.98
12251--12411
64
2.5
62
83
5
214
25
22
18
32
1.97
17269--17296
14
2.0
14
100
0
56
50
7
0
42
1.30
23319--23360
20
2.1
20
100
0
84
28
35
9
26
1.88
23862--23910
24
2.0
24
100
0
98
28
4
24
42
1.73
35958--36025
10
7.1
10
80
20
67
14
27
30
26
1.95
35938--36021
19
4.3
20
80
15
86
15
25
28
30
1.96
35957--36025
29
2.4
30
79
18
92
15
27
30
26
1.96
35957--36035
10
8.1
10
83
12
60
17
27
29
25
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35957--36037
29
2.8
30
78
16
89
17
29
28
24
1.97
54934--54962
6
4.8
6
100
0
58
34
31
0
34
1.58
56251--56407
82
1.9
81
92
1
260
36
8
11
43
1.71
60546--60676
60
2.2
60
76
13
135
31
11
16
41
1.83
61746--61790
19
2.4
19
85
7
56
33
0
2
64
1.06
64296--64462
78
2.1
81
87
6
243
38
16
9
35
1.82
66929--66993
2
32.5
2
100
0
130
50
0
0
49
1.00
70161--70248
46
1.9
46
83
0
113
34
19
25
21
1.96
75917--75977
31
2.0
31
100
0
122
21
19
19
39
1.93

Tables:   1

The End!