Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004111.1 Hibiscus syriacus cultivar Beakdansim tig00008997_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55070

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9000--9037
11
3.4
11
80
20
51
21
15
26
36
1.93
8981--9048
23
2.9
23
88
2
91
23
17
25
33
1.96
9031--9055
11
2.3
11
100
0
50
24
32
8
36
1.84
10463--10538
29
2.6
29
95
0
134
40
13
13
32
1.83
11316--11365
14
3.6
14
83
0
64
24
2
38
36
1.67
12614--12666
26
2.0
26
92
0
88
39
13
3
43
1.62
12608--12666
26
2.3
25
85
8
82
42
13
5
38
1.66
20095--20193
33
3.0
33
87
1
135
36
20
14
29
1.91
23463--23637
90
2.0
89
94
1
305
45
6
9
38
1.63
30092--30263
90
1.9
87
94
3
299
45
5
10
38
1.63
32088--32260
90
1.9
88
95
2
310
45
6
10
38
1.64
34085--34257
90
1.9
88
95
2
310
45
6
10
38
1.64
36084--36256
90
1.9
88
95
2
310
45
6
10
38
1.64
38973--39071
33
3.0
33
89
4
146
37
23
14
25
1.92
53743--53787
22
2.0
22
86
0
63
48
11
2
37
1.51

Tables:   1

The End!