Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004113.1 Hibiscus syriacus cultivar Beakdansim tig00009000_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39180

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7442--7524
2
41.5
2
100
0
166
50
0
0
49
1.00
8508--8964
138
3.3
137
86
2
612
32
17
20
28
1.96
11918--11970
23
2.3
23
90
0
88
24
24
28
22
2.00
12193--12248
21
2.7
21
94
2
96
28
25
8
37
1.86
13582--13662
24
3.4
24
98
0
153
22
27
20
29
1.99
18144--18183
16
2.5
16
95
0
71
15
25
2
57
1.50
19785--19837
23
2.2
24
90
6
81
32
22
20
24
1.98
21939--22014
2
38.0
2
100
0
152
50
0
0
50
1.00
22130--22186
23
2.5
23
91
0
87
26
26
26
21
1.99
22845--22897
22
2.4
21
75
9
52
35
13
3
47
1.61
23704--23752
22
2.2
22
89
7
73
24
12
12
51
1.73
23781--23949
24
7.0
24
94
2
295
22
28
19
29
1.98
31174--31219
21
2.2
21
88
0
65
36
28
15
19
1.92
31181--31220
21
1.9
21
94
0
71
32
30
15
22
1.94
31246--31284
19
2.1
19
95
0
69
20
33
15
30
1.94
31202--31410
64
3.2
65
80
8
223
30
24
16
27
1.97
31362--31410
19
2.6
19
84
9
57
24
30
18
26
1.98

Tables:   1

The End!