Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004115.1 Hibiscus syriacus cultivar Beakdansim tig00009005_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53222

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81--130
23
2.2
23
92
0
82
16
26
28
30
1.96
1585--1648
32
2.0
32
96
0
119
15
39
6
39
1.73
2603--2627
2
12.5
2
100
0
50
48
0
0
52
1.00
5817--5854
6
6.3
6
100
0
76
34
0
50
15
1.45
9054--9110
27
2.2
26
84
9
71
47
0
3
49
1.18
10319--10350
7
4.6
7
96
0
55
46
0
0
53
1.00
12004--12030
14
1.9
14
100
0
54
14
22
22
40
1.90
19165--19190
12
2.2
12
100
0
52
26
7
30
34
1.85
20175--20229
2
28.0
2
96
3
103
49
0
0
50
1.00
21646--21678
16
2.1
16
94
0
57
33
0
0
66
0.92
21809--21873
2
32.5
2
90
0
103
47
3
0
49
1.17
23025--23064
11
3.8
10
87
12
62
15
0
0
85
0.61
23018--23066
22
2.2
23
82
10
66
18
6
0
75
1.00
23025--23057
15
2.2
15
94
0
57
15
0
0
84
0.61
23025--23065
10
3.8
11
87
12
59
17
0
0
82
0.66
32455--32572
60
2.0
60
85
6
159
49
12
26
11
1.75
33102--33130
11
2.6
11
100
0
58
93
6
0
0
0.36
33344--34277
105
9.0
104
87
7
1300
34
25
18
22
1.96
33344--34271
309
3.0
307
90
4
1462
34
25
18
22
1.96
33971--34126
43
3.4
43
68
13
132
34
25
18
21
1.96
33763--34162
98
4.1
95
92
3
570
34
25
18
23
1.96
34154--34186
12
2.8
12
100
0
66
33
27
12
27
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33868--34162
94
3.1
92
95
1
401
34
24
17
23
1.96
34060--34277
118
1.8
118
94
0
382
33
26
17
22
1.96
36119--36151
16
2.1
16
94
0
57
33
0
0
66
0.92

Tables:   1

The End!