Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01000412.1 Hibiscus syriacus cultivar Beakdansim tig00000758_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 62826
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Found at i:4171 original size:16 final size:16
Alignment explanation
Indices: 4150--4182 Score: 57
Period size: 16 Copynumber: 2.1 Consensus size: 16
4140 TAATAAATAA
*
4150 ACGAACATAATCGAAC
1 ACGAACATAAACGAAC
4166 ACGAACATAAACGAAC
1 ACGAACATAAACGAAC
4182 A
1 A
4183 AAATTTTTTT
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
16 16 1.00
ACGTcount: A:0.55, C:0.24, G:0.12, T:0.09
Consensus pattern (16 bp):
ACGAACATAAACGAAC
Found at i:4576 original size:10 final size:10
Alignment explanation
Indices: 4563--4592 Score: 51
Period size: 10 Copynumber: 3.0 Consensus size: 10
4553 TCAAACATAA
4563 ATAAACGAAC
1 ATAAACGAAC
*
4573 ATAAATGAAC
1 ATAAACGAAC
4583 ATAAACGAAC
1 ATAAACGAAC
4593 GAACATATAA
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
10 18 1.00
ACGTcount: A:0.60, C:0.17, G:0.10, T:0.13
Consensus pattern (10 bp):
ATAAACGAAC
Found at i:4585 original size:24 final size:26
Alignment explanation
Indices: 4556--4608 Score: 74
Period size: 24 Copynumber: 2.1 Consensus size: 26
4546 CCTCTGTTCA
*
4556 AACATAAATAAACGAACATA-AAT-G
1 AACATAAACAAACGAACATATAATCG
*
4580 AACATAAACGAACGAACATATAATCG
1 AACATAAACAAACGAACATATAATCG
4606 AAC
1 AAC
4609 GTTCACGAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
24 18 0.72
25 3 0.12
26 4 0.16
ACGTcount: A:0.58, C:0.17, G:0.09, T:0.15
Consensus pattern (26 bp):
AACATAAACAAACGAACATATAATCG
Found at i:12375 original size:24 final size:24
Alignment explanation
Indices: 12334--12413 Score: 88
Period size: 24 Copynumber: 3.3 Consensus size: 24
12324 CATTTTTCCT
*** *
12334 TTCGTTTAAATCCGTTCGCTTATG
1 TTCGTTTAAATTAATTCGCTTGTG
* *
12358 TTCGTTTAAATTTATTCGCATGTG
1 TTCGTTTAAATTAATTCGCTTGTG
* *
12382 TTCGTTTATATTAATTCGTTTGTG
1 TTCGTTTAAATTAATTCGCTTGTG
12406 TTCGTTTA
1 TTCGTTTA
12414 TCGTTTTAAC
Statistics
Matches: 47, Mismatches: 9, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
24 47 1.00
ACGTcount: A:0.17, C:0.14, G:0.16, T:0.53
Consensus pattern (24 bp):
TTCGTTTAAATTAATTCGCTTGTG
Found at i:12754 original size:16 final size:17
Alignment explanation
Indices: 12728--12760 Score: 59
Period size: 16 Copynumber: 2.0 Consensus size: 17
12718 CGTATATAAT
12728 TTTATTTTTAATTTTTG
1 TTTATTTTTAATTTTTG
12745 TTTA-TTTTAATTTTTG
1 TTTATTTTTAATTTTTG
12761 ATTTCATTAA
Statistics
Matches: 16, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
16 12 0.75
17 4 0.25
ACGTcount: A:0.18, C:0.00, G:0.06, T:0.76
Consensus pattern (17 bp):
TTTATTTTTAATTTTTG
Found at i:14122 original size:31 final size:31
Alignment explanation
Indices: 14087--14192 Score: 104
Period size: 31 Copynumber: 3.4 Consensus size: 31
14077 TAGAGTTTGG
* * * *
14087 TAAATTTAATTATCGTTTTATAATATTTTAA
1 TAAATTTAATAATCATTTTGTAATAATTTAA
*
14118 TAAATTTAATAATCATTTTGTAATAATTTGA
1 TAAATTTAATAATCATTTTGTAATAATTTAA
** * * * *
14149 TAAAAAATAATGATCTTTTTGTAATAGTTCAA
1 T-AAATTTAATAATCATTTTGTAATAATTTAA
14181 TAAATTTAATAA
1 TAAATTTAATAA
14193 CTATTTTATA
Statistics
Matches: 59, Mismatches: 15, Indels: 2
0.78 0.20 0.03
Matches are distributed among these distances:
31 35 0.59
32 24 0.41
ACGTcount: A:0.43, C:0.04, G:0.06, T:0.47
Consensus pattern (31 bp):
TAAATTTAATAATCATTTTGTAATAATTTAA
Found at i:14184 original size:32 final size:32
Alignment explanation
Indices: 14124--14184 Score: 77
Period size: 32 Copynumber: 1.9 Consensus size: 32
14114 TTAATAAATT
**
14124 TAATAATCATTTTGTAATAATTTGATAAAAAA
1 TAATAATCATTTTGTAATAATTCAATAAAAAA
* * *
14156 TAATGATCTTTTTGTAATAGTTCAATAAA
1 TAATAATCATTTTGTAATAATTCAATAAA
14185 TTTAATAACT
Statistics
Matches: 24, Mismatches: 5, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
32 24 1.00
ACGTcount: A:0.44, C:0.05, G:0.08, T:0.43
Consensus pattern (32 bp):
TAATAATCATTTTGTAATAATTCAATAAAAAA
Found at i:20974 original size:70 final size:70
Alignment explanation
Indices: 20861--21000 Score: 271
Period size: 70 Copynumber: 2.0 Consensus size: 70
20851 CCGATGACGT
*
20861 GCTATGTTTTACCTGAAACCGATATATCATTCTCTATGTAACGATGGGGTGTTGAACTTATTTCA
1 GCTATGTTTTACCTGAAACCGATATATCATTCTCTATGTAACGATGGGGTGTTGAACTCATTTCA
20926 GCCTA
66 GCCTA
20931 GCTATGTTTTACCTGAAACCGATATATCATTCTCTATGTAACGATGGGGTGTTGAACTCATTTCA
1 GCTATGTTTTACCTGAAACCGATATATCATTCTCTATGTAACGATGGGGTGTTGAACTCATTTCA
20996 GCCTA
66 GCCTA
21001 AGGGTTCTAC
Statistics
Matches: 69, Mismatches: 1, Indels: 0
0.99 0.01 0.00
Matches are distributed among these distances:
70 69 1.00
ACGTcount: A:0.26, C:0.19, G:0.19, T:0.36
Consensus pattern (70 bp):
GCTATGTTTTACCTGAAACCGATATATCATTCTCTATGTAACGATGGGGTGTTGAACTCATTTCA
GCCTA
Found at i:25134 original size:132 final size:129
Alignment explanation
Indices: 24893--25145 Score: 305
Period size: 132 Copynumber: 1.9 Consensus size: 129
24883 AATATCTCTG
* * **
24893 TTGTAGATAATGTTGCAGACGATGATGATGAAACTGATGAAACTCGTGATAGCGAAAATCGATTG
1 TTGTAGATAATGTTGCAGACAATGATGATGAAACTGAAGAAACTCGTGATAGCGAAAATCGATCA
* * * *
24958 GAAACATCTGCTTCCGAACTTGATAAGGTTTCTTCTGAGACTGCATACTTGGAGGATCGAAACA
66 GAAACAGCTGCTTCCGAACTTGATAAGCTTTCTTCTGAGACTGCAAACATGGAGGATCGAAACA
* * * * *
25022 TTGTTGATAATGTTGCAGATAATGAAGCTGATGAAACTGAAGGAACTCGTGATAGTGAAACTCGA
1 TTGTAGATAATGTTGCAGACAATG-A--TGATGAAACTGAAGAAACTCGTGATAGCGAAAATCGA
*
25087 TCAGAAGA-AGCTGCTAT-CGAACTTGATAAGCTTTCTT-TCGAGCCTGCAAACATGGAGGA
63 TCAGAA-ACAGCTGCT-TCCGAACTTGATAAGCTTTCTTCT-GAGACTGCAAACATGGAGGA
25146 CGGGAACAAT
Statistics
Matches: 104, Mismatches: 14, Indels: 9
0.82 0.11 0.07
Matches are distributed among these distances:
129 21 0.20
130 1 0.01
131 1 0.01
132 79 0.76
133 2 0.02
ACGTcount: A:0.33, C:0.15, G:0.25, T:0.27
Consensus pattern (129 bp):
TTGTAGATAATGTTGCAGACAATGATGATGAAACTGAAGAAACTCGTGATAGCGAAAATCGATCA
GAAACAGCTGCTTCCGAACTTGATAAGCTTTCTTCTGAGACTGCAAACATGGAGGATCGAAACA
Found at i:35157 original size:16 final size:15
Alignment explanation
Indices: 35123--35155 Score: 50
Period size: 15 Copynumber: 2.2 Consensus size: 15
35113 AATATATATG
35123 AAATATTATAAGATA
1 AAATATTATAAGATA
35138 AAATCATTATAA-ATA
1 AAAT-ATTATAAGATA
35153 AAA
1 AAA
35156 ATAATTTTAT
Statistics
Matches: 17, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
15 10 0.59
16 7 0.41
ACGTcount: A:0.64, C:0.03, G:0.03, T:0.30
Consensus pattern (15 bp):
AAATATTATAAGATA
Found at i:36387 original size:12 final size:10
Alignment explanation
Indices: 36346--36386 Score: 57
Period size: 10 Copynumber: 4.1 Consensus size: 10
36336 TTTATCACAC
36346 CAAATTCTCT
1 CAAATTCTCT
36356 CAAATTCTCT
1 CAAATTCTCT
36366 -AAATTTCTCT
1 CAAA-TTCTCT
*
36376 CAAATACTCT
1 CAAATTCTCT
36386 C
1 C
36387 TTTTTTTAAG
Statistics
Matches: 28, Mismatches: 1, Indels: 4
0.85 0.03 0.12
Matches are distributed among these distances:
9 3 0.11
10 22 0.79
11 3 0.11
ACGTcount: A:0.32, C:0.29, G:0.00, T:0.39
Consensus pattern (10 bp):
CAAATTCTCT
Found at i:36706 original size:111 final size:111
Alignment explanation
Indices: 36512--36844 Score: 594
Period size: 111 Copynumber: 3.0 Consensus size: 111
36502 TGGAAATCAT
* *
36512 ATATCTCTACACTTTGCTGATACGGTAACATTTTGACGTTTTAATTTAATTTAAATTATTAGTAA
1 ATATCTCGACACTTTGCTGATACGGTAACATTTTAACGTTTTAATTTAATTTAAATTATTAGTAA
* *
36577 TATTTAGTTGGTTTATTTAATGCATGATTATTAGATTAAGAATTAA
66 TAATTAGTTGATTTATTTAATGCATGATTATTAGATTAAGAATTAA
* * *
36623 ATATCTCGACATTTTGCTAATACGGTAATATTTTAACGTTTTAATTTAATTTAAATTATTAGTAA
1 ATATCTCGACACTTTGCTGATACGGTAACATTTTAACGTTTTAATTTAATTTAAATTATTAGTAA
36688 TAATTAGTTGATTTATTTAATGCATGATTATTAGATTAAGAATTAA
66 TAATTAGTTGATTTATTTAATGCATGATTATTAGATTAAGAATTAA
36734 ATATCTCGACACTTTGCTGATACGGTAACATTTTAACGTTTTAATTTAATTTAAATTATTAGTAA
1 ATATCTCGACACTTTGCTGATACGGTAACATTTTAACGTTTTAATTTAATTTAAATTATTAGTAA
*
36799 TAATTAGTTGATTTATTTAATACATGATTATTAGATTAAGAATTAA
66 TAATTAGTTGATTTATTTAATGCATGATTATTAGATTAAGAATTAA
36845 TTTTTGTAAT
Statistics
Matches: 211, Mismatches: 11, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
111 211 1.00
ACGTcount: A:0.36, C:0.08, G:0.11, T:0.45
Consensus pattern (111 bp):
ATATCTCGACACTTTGCTGATACGGTAACATTTTAACGTTTTAATTTAATTTAAATTATTAGTAA
TAATTAGTTGATTTATTTAATGCATGATTATTAGATTAAGAATTAA
Found at i:38407 original size:27 final size:26
Alignment explanation
Indices: 38364--38425 Score: 79
Period size: 27 Copynumber: 2.3 Consensus size: 26
38354 ATCCATATAT
* *
38364 GATGTCGTCATCGCCTTTCTATTACCA
1 GATGTCG-CATCACCTTTCAATTACCA
*
38391 GATGTCGCAATCACCTTTCAATTATCA
1 GATGTCGC-ATCACCTTTCAATTACCA
38418 GATGTCGC
1 GATGTCGC
38426 CGTCTCCGCC
Statistics
Matches: 31, Mismatches: 3, Indels: 2
0.86 0.08 0.06
Matches are distributed among these distances:
26 1 0.03
27 30 0.97
ACGTcount: A:0.23, C:0.27, G:0.16, T:0.34
Consensus pattern (26 bp):
GATGTCGCATCACCTTTCAATTACCA
Found at i:38754 original size:18 final size:18
Alignment explanation
Indices: 38731--38788 Score: 56
Period size: 18 Copynumber: 3.6 Consensus size: 18
38721 ACATGCTTAG
38731 GATGACGACAACGACGAT
1 GATGACGACAACGACGAT
*
38749 GATGACG---ATG--G-T
1 GATGACGACAACGACGAT
*
38761 GATGACGACGACGACGAT
1 GATGACGACAACGACGAT
38779 GATGACGACA
1 GATGACGACA
38789 TCGAGGAGTC
Statistics
Matches: 31, Mismatches: 3, Indels: 12
0.67 0.07 0.26
Matches are distributed among these distances:
12 8 0.26
13 1 0.03
15 4 0.13
17 1 0.03
18 17 0.55
ACGTcount: A:0.34, C:0.19, G:0.33, T:0.14
Consensus pattern (18 bp):
GATGACGACAACGACGAT
Found at i:38764 original size:15 final size:15
Alignment explanation
Indices: 38731--38787 Score: 60
Period size: 15 Copynumber: 3.8 Consensus size: 15
38721 ACATGCTTAG
* *
38731 GATGACGACAACGAC
1 GATGATGACGACGAC
* **
38746 GATGATGACGATGGT
1 GATGATGACGACGAC
*
38761 GATGACGACGACGAC
1 GATGATGACGACGAC
38776 GATGATGACGAC
1 GATGATGACGAC
38788 ATCGAGGAGT
Statistics
Matches: 32, Mismatches: 10, Indels: 0
0.76 0.24 0.00
Matches are distributed among these distances:
15 32 1.00
ACGTcount: A:0.33, C:0.19, G:0.33, T:0.14
Consensus pattern (15 bp):
GATGATGACGACGAC
Found at i:44904 original size:30 final size:30
Alignment explanation
Indices: 44843--44915 Score: 85
Period size: 30 Copynumber: 2.4 Consensus size: 30
44833 GGTCTTTTAA
*
44843 TAAATTTATCAAAATATTACATAATAATAT
1 TAAATTTATCAAAATATTACATAAGAATAT
* * *
44873 TAAATTTATTAAAATATTATA-AACGATTAT
1 TAAATTTATCAAAATATTACATAA-GAATAT
*
44903 TAAATTTGTCAAA
1 TAAATTTATCAAA
44916 TTTTACGATC
Statistics
Matches: 36, Mismatches: 6, Indels: 2
0.82 0.14 0.05
Matches are distributed among these distances:
29 2 0.06
30 34 0.94
ACGTcount: A:0.51, C:0.05, G:0.03, T:0.41
Consensus pattern (30 bp):
TAAATTTATCAAAATATTACATAAGAATAT
Found at i:47189 original size:17 final size:17
Alignment explanation
Indices: 47167--47201 Score: 54
Period size: 17 Copynumber: 2.1 Consensus size: 17
47157 GAATAATCAT
47167 AATTATAAT-TAGTTAAA
1 AATTATAATAT-GTTAAA
47184 AATTATAATATGTTAAA
1 AATTATAATATGTTAAA
47201 A
1 A
47202 TCTAAATTGT
Statistics
Matches: 17, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
17 16 0.94
18 1 0.06
ACGTcount: A:0.54, C:0.00, G:0.06, T:0.40
Consensus pattern (17 bp):
AATTATAATATGTTAAA
Found at i:47735 original size:194 final size:191
Alignment explanation
Indices: 47404--47789 Score: 499
Period size: 194 Copynumber: 2.0 Consensus size: 191
47394 AATTTAATTA
* *
47404 AAATAAAATATTTATAAAATATTAGTTTTTAGGGTAAACTATATCATTGACCACATAACCCCTTT
1 AAATAAAATATTTAAAAAATATTAGTTTTTAGGGTAAACTATACCATTGACCACATAACCCCTTT
* * * * * *
47469 TACTTTAATCACTGATTTTTTATTTTTTATTAATCGGGTCACCTATCTATTTAAATCTTATCAAT
66 TACGTTAACCACTGAATTTTTATTTTTTATCAATCGGGTCACATAACTATTTAAATCTTATCAAT
* * * * *
47534 CAAGCCATCTGTCAGTAAATATTAACGGAGTAGATAAC-TGGCAGTTAATGAAATTTGTAT
131 CAAGCCATCAGCCAGTAAATATTAACGGAGGAGATAACATGACAATTAATGAAATTTGTAT
* *
47594 AAATATAATATTTAAAAAATATTAG-TTTTAGGGTAAACTATACCATTGACCACCTAACTATTTA
1 AAATAAAATATTTAAAAAATATTAGTTTTTAGGGTAAACTATACCATTGACCACATAAC------
* *
47658 CCCTTTTACGTTAACCACT-AATTTTTCTTTTTTATCAATCGGGTCATATAACTATTTAAATCTT
60 CCCTTTTACGTTAACCACTGAATTTTTATTTTTTATCAATCGGGTCACATAACTATTTAAATCTT
* * ** *
47722 GTCAATCAAGCCATCAGCCATTAAATATTAACGGAGGAGATGTCATGACAATTAATTAAATTTGT
125 ATCAATCAAGCCATCAGCCAGTAAATATTAACGGAGGAGATAACATGACAATTAATGAAATTTGT
47787 AT
190 AT
47789 A
1 A
47790 GTTATATATT
Statistics
Matches: 167, Mismatches: 22, Indels: 9
0.84 0.11 0.05
Matches are distributed among these distances:
189 31 0.19
190 23 0.14
194 76 0.46
195 37 0.22
ACGTcount: A:0.36, C:0.15, G:0.11, T:0.38
Consensus pattern (191 bp):
AAATAAAATATTTAAAAAATATTAGTTTTTAGGGTAAACTATACCATTGACCACATAACCCCTTT
TACGTTAACCACTGAATTTTTATTTTTTATCAATCGGGTCACATAACTATTTAAATCTTATCAAT
CAAGCCATCAGCCAGTAAATATTAACGGAGGAGATAACATGACAATTAATGAAATTTGTAT
Found at i:49962 original size:15 final size:14
Alignment explanation
Indices: 49938--49969 Score: 55
Period size: 15 Copynumber: 2.2 Consensus size: 14
49928 GATTTTTTAA
49938 AAATTAAAAAAATT
1 AAATTAAAAAAATT
49952 AAATATAAAAAAATT
1 AAAT-TAAAAAAATT
49967 AAA
1 AAA
49970 AATTTCAGGA
Statistics
Matches: 17, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
14 4 0.24
15 13 0.76
ACGTcount: A:0.75, C:0.00, G:0.00, T:0.25
Consensus pattern (14 bp):
AAATTAAAAAAATT
Found at i:50348 original size:22 final size:24
Alignment explanation
Indices: 50301--50348 Score: 64
Period size: 22 Copynumber: 2.1 Consensus size: 24
50291 TTTATGTTAC
**
50301 AAATATATTATTTAAAAAAATTAA
1 AAATATATTATTTAAAAAAAAGAA
50325 AAATATA-T-TTTAAAAAAAAGAA
1 AAATATATTATTTAAAAAAAAGAA
50347 AA
1 AA
50349 TACATAAAAT
Statistics
Matches: 22, Mismatches: 2, Indels: 2
0.85 0.08 0.08
Matches are distributed among these distances:
22 14 0.64
23 1 0.05
24 7 0.32
ACGTcount: A:0.67, C:0.00, G:0.02, T:0.31
Consensus pattern (24 bp):
AAATATATTATTTAAAAAAAAGAA
Found at i:50350 original size:21 final size:23
Alignment explanation
Indices: 50301--50348 Score: 62
Period size: 23 Copynumber: 2.1 Consensus size: 23
50291 TTTATGTTAC
50301 AAATATATTATTTAAAAAAATTAA
1 AAATATATTATTTAAAAAAA-TAA
* *
50325 AAATATATT-TTAAAAAAAAGAA
1 AAATATATTATTTAAAAAAATAA
50347 AA
1 AA
50349 TACATAAAAT
Statistics
Matches: 22, Mismatches: 2, Indels: 2
0.85 0.08 0.08
Matches are distributed among these distances:
22 4 0.18
23 9 0.41
24 9 0.41
ACGTcount: A:0.67, C:0.00, G:0.02, T:0.31
Consensus pattern (23 bp):
AAATATATTATTTAAAAAAATAA
Found at i:51289 original size:21 final size:21
Alignment explanation
Indices: 51264--51310 Score: 76
Period size: 21 Copynumber: 2.2 Consensus size: 21
51254 TTGATATTTT
* *
51264 AACCTCTATGGCCACGGTATG
1 AACCTCCATGGCCAAGGTATG
51285 AACCTCCATGGCCAAGGTATG
1 AACCTCCATGGCCAAGGTATG
51306 AACCT
1 AACCT
51311 GTAACATCAT
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
21 24 1.00
ACGTcount: A:0.28, C:0.30, G:0.21, T:0.21
Consensus pattern (21 bp):
AACCTCCATGGCCAAGGTATG
Found at i:57253 original size:14 final size:15
Alignment explanation
Indices: 57234--57264 Score: 55
Period size: 15 Copynumber: 2.1 Consensus size: 15
57224 GTAAATAAAA
57234 TTTCAAA-AGAGAAT
1 TTTCAAAGAGAGAAT
57248 TTTCAAAGAGAGAAT
1 TTTCAAAGAGAGAAT
57263 TT
1 TT
57265 CACAACACAT
Statistics
Matches: 16, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
14 7 0.44
15 9 0.56
ACGTcount: A:0.45, C:0.06, G:0.16, T:0.32
Consensus pattern (15 bp):
TTTCAAAGAGAGAAT
Found at i:57265 original size:14 final size:13
Alignment explanation
Indices: 57232--57266 Score: 52
Period size: 14 Copynumber: 2.5 Consensus size: 13
57222 TTGTAAATAA
57232 AATTTCAAAAGAG
1 AATTTCAAAAGAG
57245 AATTTTCAAAGAGAG
1 AA-TTTCAAA-AGAG
57260 AATTTCA
1 AATTTCA
57267 CAACACATAA
Statistics
Matches: 20, Mismatches: 0, Indels: 3
0.87 0.00 0.13
Matches are distributed among these distances:
13 2 0.10
14 12 0.60
15 6 0.30
ACGTcount: A:0.49, C:0.09, G:0.14, T:0.29
Consensus pattern (13 bp):
AATTTCAAAAGAG
Done.