Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004120.1 Hibiscus syriacus cultivar Beakdansim tig00009016_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44924

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
444--489
20
2.4
19
79
13
58
52
4
2
41
1.33
3147--3183
20
1.9
19
89
10
58
45
10
24
18
1.81
3563--3628
27
2.4
27
80
12
73
31
3
0
65
1.08
9129--9154
7
3.7
7
100
0
52
38
0
0
61
0.96
9258--9314
15
3.7
15
77
9
69
21
33
28
17
1.96
18383--18442
30
2.0
30
100
0
120
20
6
26
46
1.75
19920--20086
31
5.4
30
74
19
105
49
1
1
47
1.19
19915--20085
2
88.5
2
74
15
146
49
1
1
47
1.19
20267--20336
19
3.6
20
79
11
83
48
0
28
22
1.51
20755--20779
7
3.6
7
100
0
50
32
44
0
24
1.54
20748--20786
14
2.8
14
84
0
60
35
43
0
20
1.52
20832--20874
21
2.0
22
90
4
70
48
4
2
44
1.36
20863--20966
48
2.1
49
82
3
120
49
12
6
31
1.67
21381--21422
2
20.0
2
85
9
57
50
2
2
45
1.27
21506--21570
7
9.3
7
77
0
58
46
32
0
21
1.52
20814--22056
558
2.3
549
89
5
1903
44
11
9
35
1.72
21895--21953
17
3.3
19
83
9
63
47
6
6
38
1.57
21922--21955
9
3.9
9
84
7
52
55
5
0
38
1.24
21915--21953
17
2.2
18
95
4
71
51
5
2
41
1.38
22366--22392
13
2.1
13
100
0
54
44
0
0
55
0.99
22407--22445
20
2.0
20
84
0
51
46
7
7
38
1.61
22432--22470
2
20.0
2
94
5
71
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22554--22614
14
4.4
14
82
0
59
50
26
0
22
1.49
22784--22830
14
3.7
14
71
26
50
51
4
0
44
1.21
22782--22831
23
2.1
24
96
3
93
48
4
0
48
1.20
28080--28214
67
2.0
67
97
0
252
34
13
24
28
1.93
29277--29404
43
3.1
41
79
7
134
35
18
14
31
1.91
37346--37383
19
2.0
19
100
0
76
26
15
31
26
1.96
39484--39508
13
1.9
13
100
0
50
56
0
12
32
1.36
40032--40104
21
3.5
21
69
14
60
38
19
16
26
1.92

Tables:   1

The End!