Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004125.1 Hibiscus syriacus cultivar Beakdansim tig00009025_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76706

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--59909
84
717.9
84
84
2
70791
23
17
22
36
1.95
2--76704
168
460.3
168
82
4
82029
23
17
22
36
1.95
2--76704
252
306.9
252
82
4
83228
23
17
22
36
1.95
59842--59979
70
2.0
70
85
2
188
24
18
21
34
1.96
64371--64627
141
1.8
141
88
3
401
26
17
21
35
1.95
67423--67458
18
2.0
18
94
0
63
25
11
19
44
1.83
59909--67440
84
90.5
84
77
9
5904
23
17
22
35
1.95
67339--67541
102
2.0
102
87
0
289
24
15
22
37
1.92
67255--67789
186
3.0
182
85
7
656
22
17
23
36
1.94
67441--68455
84
12.1
84
85
3
1240
22
18
22
35
1.95
68364--68558
103
1.9
103
86
0
282
24
18
20
36
1.95
68459--76704
84
100.4
84
84
5
9993
23
18
22
35
1.95
68305--68642
187
1.8
187
86
2
500
23
18
22
35
1.96
68459--76704
251
33.5
252
84
5
9670
23
18
22
35
1.95

Tables:   1

The End!