Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004133.1 Hibiscus syriacus cultivar Beakdansim tig00009039_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82729

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6145--6169
12
2.1
12
100
0
50
52
8
8
32
1.60
29159--29278
59
2.0
59
87
3
170
35
24
15
24
1.94
32616--32652
20
1.9
19
89
10
58
45
10
27
16
1.80
34066--34182
59
2.0
59
93
3
200
35
24
15
24
1.94
34522--34638
59
2.0
59
86
3
164
38
22
12
26
1.90
38174--38243
14
5.0
14
85
0
104
17
18
10
54
1.70
38173--38243
28
2.5
28
100
0
142
16
18
11
53
1.72
42906--42990
14
5.9
14
78
8
89
16
17
10
55
1.69
42905--42990
45
1.9
45
95
0
154
16
17
11
54
1.70
44239--44396
81
2.0
81
93
0
271
27
10
25
35
1.90
44930--44960
2
16.0
2
93
6
55
51
0
0
48
1.00
52558--52594
17
2.1
18
90
5
58
51
0
2
45
1.15
66274--66342
36
1.9
36
96
0
129
40
18
13
27
1.88
67146--67188
17
2.5
17
92
0
77
23
20
6
48
1.73
72755--72784
14
2.1
14
93
0
51
60
16
13
10
1.59
72800--72860
13
4.8
13
75
15
56
59
19
9
11
1.60
72801--72846
23
2.0
24
86
4
67
56
21
10
10
1.64
72850--72884
10
3.5
10
88
0
52
65
14
8
11
1.46
76457--76525
23
3.0
23
82
0
84
28
24
24
21
1.99
76798--76865
29
2.3
29
100
0
136
33
14
16
35
1.89
76800--76876
29
2.4
33
79
20
108
33
14
15
36
1.88
82508--82591
32
2.9
29
80
16
84
22
20
10
46
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82531--82598
32
2.1
32
100
0
136
25
20
8
45
1.80

Tables:   1

The End!