Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004134.1 Hibiscus syriacus cultivar Beakdansim tig00009042_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55578

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
343--378
19
2.0
19
89
10
58
30
8
0
61
1.26
20408--20447
22
1.9
22
85
10
57
40
2
7
50
1.44
27226--27265
18
2.3
18
87
12
57
35
12
20
32
1.90
37695--37742
20
2.5
20
83
10
55
33
16
0
50
1.46
38174--38246
3
24.7
3
94
2
130
1
30
0
68
0.98
39616--39676
24
2.5
24
97
0
113
39
11
13
36
1.80
39762--39809
20
2.4
20
85
0
60
43
14
12
29
1.82
42179--42231
23
2.3
23
96
0
97
45
3
26
24
1.70
43537--43643
31
3.4
31
83
3
126
11
25
32
30
1.91
44210--44256
21
2.1
23
84
11
62
29
0
6
63
1.19
45488--45571
31
2.9
29
83
5
98
28
7
4
59
1.44

Tables:   1

The End!