Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004139.1 Hibiscus syriacus cultivar Beakdansim tig00009053_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65448

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18624--18670
18
2.6
18
93
0
76
0
21
34
44
1.52
18626--18669
12
3.7
12
82
11
54
0
22
36
40
1.54
24135--24165
5
6.2
5
96
0
53
0
22
22
54
1.44
27992--28027
6
6.0
6
100
0
72
33
0
66
0
0.92
34215--34281
31
2.3
30
87
7
93
52
2
5
38
1.41
34780--34805
3
8.7
3
100
0
52
0
0
65
34
0.93
35355--35403
21
2.3
22
89
6
75
53
0
4
42
1.20
43189--43245
21
2.7
21
94
2
96
40
14
26
19
1.89
44251--44398
76
1.9
76
81
8
176
31
18
7
42
1.78
44332--44458
60
2.1
59
80
8
132
33
14
7
43
1.75
44649--44716
32
2.1
32
91
5
111
20
27
7
44
1.78
44869--45026
60
2.6
60
81
0
199
40
3
20
35
1.70
46027--46057
2
15.5
2
100
0
62
48
0
0
51
1.00
59053--59080
9
3.1
9
100
0
56
78
0
0
21
0.75
62165--62197
15
2.3
15
89
5
50
18
6
3
72
1.18
65192--65238
23
2.0
23
84
8
60
53
0
0
46
1.00
65170--65237
28
2.5
26
76
11
73
52
0
0
47
1.00
65236--65290
24
2.3
24
90
0
83
25
47
14
12
1.80
65236--65290
12
4.6
12
81
0
65
25
47
14
12
1.80

Tables:   1

The End!