Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000414.1 Hibiscus syriacus cultivar Beakdansim tig00000760_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65328

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2053--2101
24
2.0
24
100
0
98
42
24
4
28
1.73
6155--6268
60
1.9
59
83
5
149
54
4
1
39
1.31
8622--8649
14
2.0
14
100
0
56
42
0
7
50
1.30
8842--8884
22
2.0
21
86
8
61
25
0
0
74
0.82
9113--9184
2
36.0
2
100
0
144
50
0
0
50
1.00
13536--13696
64
2.5
63
82
5
207
32
18
23
24
1.97
13704--13741
20
1.9
20
100
0
76
31
21
23
23
1.98
14690--14742
23
2.3
23
90
0
79
16
26
26
30
1.97
15661--15718
20
2.6
22
89
10
84
31
22
22
24
1.99
16686--16737
23
2.3
23
86
0
68
17
28
25
28
1.97
18062--18113
7
7.4
7
77
16
54
23
0
32
44
1.54
18596--18629
7
4.9
7
85
0
50
26
0
26
47
1.53
18596--18635
21
1.9
21
94
0
71
25
0
27
47
1.52
18655--18684
14
2.1
14
93
0
51
23
0
30
46
1.52
23663--23733
33
2.2
33
94
0
124
52
4
5
38
1.45
23943--23972
7
4.1
7
91
8
51
53
0
3
43
1.17
23943--23972
15
2.1
14
93
6
51
53
0
3
43
1.17
34750--34794
23
2.0
23
82
8
56
26
28
22
22
1.99
34773--35076
149
2.0
149
98
0
590
36
20
16
26
1.93
35551--35701
67
2.3
66
90
4
232
15
26
28
29
1.96
41743--41787
23
2.0
23
86
0
63
26
28
24
20
1.99
41766--42067
147
2.0
148
97
1
570
36
20
16
26
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42545--42695
67
2.3
66
90
4
232
15
26
28
29
1.96
51496--51533
17
2.2
17
100
0
76
39
0
36
23
1.55
59048--59083
18
2.0
18
88
0
54
55
5
11
27
1.57
62767--62842
36
2.1
36
85
7
100
47
1
3
47
1.29

Tables:   1

The End!