Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000415.1 Hibiscus syriacus cultivar Beakdansim tig00000762_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66459

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1093--1149
22
2.5
22
83
8
62
40
22
8
28
1.84
2371--2407
18
2.1
18
100
0
74
32
24
16
27
1.96
2796--2848
21
2.5
21
81
6
63
22
0
22
54
1.45
2816--2856
21
2.0
21
85
0
55
24
0
21
53
1.46
2903--2968
21
3.1
21
84
0
87
24
1
25
48
1.60
4053--4114
30
2.0
31
84
9
83
37
12
8
41
1.73
15077--15105
14
2.1
14
100
0
58
55
6
6
31
1.53
23202--23438
118
2.0
118
97
1
449
38
12
22
26
1.90
25636--25660
6
4.2
6
100
0
50
16
0
68
16
1.22
33422--33593
29
6.0
29
89
4
260
33
2
13
50
1.56
33422--33592
84
2.0
88
90
4
278
32
2
13
50
1.56
43356--43395
19
2.2
19
90
4
64
15
20
0
65
1.28
45682--45715
18
1.9
17
88
5
50
29
32
23
14
1.94
45856--45886
16
1.9
16
93
0
53
41
19
19
19
1.90
50598--50628
12
2.6
12
89
0
53
54
6
0
38
1.26

Tables:   1

The End!