Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004152.1 Hibiscus syriacus cultivar Beakdansim tig00009081_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61269

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2006--2048
4
10.2
4
80
9
50
23
2
0
74
0.93
2006--2048
13
3.4
13
81
12
54
23
2
0
74
0.93
2133--2178
19
2.5
19
83
13
60
17
8
0
73
1.07
7664--7739
22
3.5
22
92
0
125
39
26
14
19
1.90
8676--9633
106
9.0
106
92
0
1490
34
24
18
22
1.96
10383--10487
37
2.8
37
82
0
120
40
16
13
30
1.86
10885--10924
2
20.0
2
94
0
71
47
0
2
50
1.14
10998--11022
2
12.5
2
100
0
50
48
0
0
52
1.00
11185--11232
18
2.6
19
80
12
55
27
2
0
70
0.98
11204--11261
27
2.1
28
87
9
84
22
1
0
75
0.89
11185--11235
20
2.5
20
80
0
57
25
1
0
72
0.95
11214--11260
4
11.8
4
77
8
51
23
2
0
74
0.93
13165--13274
29
3.8
29
91
3
177
33
13
10
42
1.78
15173--15958
392
2.0
388
90
2
1245
29
19
19
30
1.97
38053--38104
22
2.4
22
93
0
86
9
13
21
55
1.66
49317--49355
14
2.8
14
80
0
51
41
28
2
28
1.69
57022--57065
15
2.9
15
86
6
61
6
0
6
86
0.71

Tables:   1

The End!