Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004155.1 Hibiscus syriacus cultivar Beakdansim tig00009087_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63345

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5595--5654
17
3.5
16
84
13
75
80
1
18
0
0.80
5596--5639
8
5.5
8
86
13
56
79
2
18
0
0.83
5595--5654
9
7.0
8
76
14
57
80
1
18
0
0.80
5595--5665
23
3.0
23
74
15
65
76
2
18
2
1.04
18516--18565
21
2.4
21
78
18
59
66
0
14
20
1.26
22088--22117
15
2.0
15
93
0
51
70
6
16
6
1.31
25193--25218
5
5.2
5
100
0
52
0
19
0
80
0.71
25212--25266
23
2.4
22
84
9
65
9
7
16
67
1.40
28353--28395
20
2.2
20
87
8
61
18
23
11
46
1.82
28354--28392
13
3.0
13
84
0
51
17
17
12
51
1.76
39091--39166
35
2.2
35
85
0
98
34
3
32
28
1.76
41259--41306
21
2.3
21
96
0
87
16
18
25
39
1.91
42643--42709
27
2.5
27
76
13
75
5
10
4
79
1.05
42665--42716
9
5.6
9
77
8
59
3
9
3
82
0.91
42666--42718
17
3.1
17
84
15
65
3
9
5
81
0.98
47777--47811
16
2.1
17
89
5
54
0
11
5
82
0.82
47777--47818
21
2.0
22
86
9
61
0
11
7
80
0.88
57188--57227
15
2.6
15
88
4
53
15
12
5
67
1.38
60229--60270
18
2.4
17
81
14
50
73
4
19
2
1.12

Tables:   1

The End!