Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004157.1 Hibiscus syriacus cultivar Beakdansim tig00009095_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69464

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5826--5872
21
2.2
21
77
7
51
19
8
2
70
1.24
6558--6627
35
2.0
35
86
10
99
25
28
17
28
1.97
9939--9980
21
2.0
21
95
0
75
26
19
26
28
1.98
10095--10226
64
2.1
64
95
0
237
22
16
22
37
1.93
15866--15917
20
2.6
19
85
11
77
63
1
17
17
1.40
16184--16231
23
2.0
24
84
8
62
70
6
2
20
1.19
24560--24614
21
2.6
21
88
5
85
36
20
20
23
1.95
26776--26820
22
2.2
19
84
11
54
24
4
0
71
1.05
26859--26892
17
2.0
18
88
11
54
20
2
0
76
0.92
29779--29816
18
2.1
19
85
5
51
63
2
2
31
1.22
42537--42584
17
2.9
16
82
14
53
35
0
0
64
0.94
43668--44134
234
2.0
234
98
0
898
37
11
35
15
1.83
53375--53445
34
2.0
34
81
10
81
43
1
5
49
1.35
54344--54377
3
11.3
3
100
0
68
35
0
0
64
0.94
58128--58152
13
1.9
13
100
0
50
28
24
24
24
2.00
63071--63106
18
2.0
18
94
0
63
16
19
33
30
1.94
63086--63158
23
3.2
23
92
0
119
23
20
23
32
1.98
64626--64686
27
2.3
25
80
8
68
16
19
14
49
1.80
64627--64690
33
1.9
33
83
0
83
15
18
14
51
1.76
67122--67186
14
4.6
14
74
16
55
84
0
13
1
0.69
67120--67186
32
2.1
31
88
2
98
83
0
14
1
0.72

Tables:   1

The End!