Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004163.1 Hibiscus syriacus cultivar Beakdansim tig00009104_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65719

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8493--8542
2
25.0
2
100
0
100
50
0
0
50
1.00
29010--29068
3
20.3
3
79
6
68
62
5
1
30
1.26
29018--29067
26
1.9
26
87
0
73
64
6
2
28
1.28
29357--29463
40
2.6
41
78
11
121
23
20
32
23
1.98
29443--29570
51
2.5
51
100
0
256
18
20
34
26
1.96
29764--29859
28
3.3
28
83
12
106
44
13
15
26
1.83
29861--30043
66
2.8
63
72
8
152
38
14
19
26
1.91
30846--30961
37
3.3
37
67
20
104
46
11
12
30
1.76
30878--31008
30
4.1
30
72
21
115
41
12
12
33
1.81
30846--30991
67
2.2
67
97
0
274
45
11
12
30
1.77
31094--31195
28
3.6
28
80
10
109
46
14
11
27
1.80
31440--31543
36
3.0
36
81
4
124
36
11
20
31
1.88
31441--31559
36
3.4
36
79
6
111
36
12
21
29
1.90
31511--31743
105
2.3
101
85
8
292
37
12
19
30
1.89
39267--39325
3
20.3
3
79
6
68
62
5
1
30
1.26
39275--39324
26
1.9
26
87
0
73
64
6
2
28
1.28
41694--41744
2
25.5
2
100
0
102
50
0
0
49
1.00
49186--50597
471
3.0
472
97
0
2654
29
20
20
28
1.98
57569--57597
2
14.5
2
100
0
58
48
0
0
51
1.00
63888--63918
16
1.9
16
100
0
62
48
12
32
6
1.67
64086--64160
21
3.7
20
70
10
53
22
24
18
34
1.96
64169--64303
20
6.7
20
78
7
121
34
25
17
22
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64167--64303
41
3.4
41
85
2
186
35
24
17
21
1.95
64434--64467
12
2.9
12
86
4
52
17
41
5
35
1.74
65014--65066
23
2.3
23
87
9
81
24
15
20
39
1.91

Tables:   1

The End!