Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004165.1 Hibiscus syriacus cultivar Beakdansim tig00009107_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72971

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5083--5135
21
2.5
21
81
0
70
24
26
22
26
2.00
8448--8536
36
2.5
36
94
0
151
19
32
15
32
1.93
9862--9953
46
2.0
46
97
0
175
16
21
26
35
1.94
10316--10368
18
2.9
18
97
0
97
22
28
37
11
1.89
10589--10743
6
26.8
6
92
7
268
17
50
0
32
1.46
10589--10743
52
3.0
52
98
0
292
17
50
0
32
1.46
10735--10776
22
1.9
22
85
0
57
42
42
4
9
1.58
24798--24826
13
2.3
13
94
5
51
72
6
3
17
1.21
26571--26602
16
2.0
16
93
0
55
59
25
3
12
1.48
37544--37668
31
4.0
31
92
2
198
38
23
18
20
1.93
39401--39445
13
3.5
13
81
0
63
15
42
22
20
1.89
39435--39468
15
2.1
17
89
10
54
11
35
26
26
1.91
41902--41970
12
5.8
12
75
10
52
18
14
17
49
1.80
41879--41974
24
4.0
23
82
5
93
21
14
15
47
1.81
44062--44104
13
3.4
13
87
3
61
16
46
20
16
1.84
46563--46632
24
3.0
23
81
6
77
21
10
17
51
1.74
50872--50922
23
2.2
25
80
20
65
66
1
1
29
1.13
57849--57924
36
2.1
36
85
7
100
47
1
3
47
1.29
57901--57949
18
2.7
18
75
9
55
51
4
2
42
1.32
58727--58777
26
1.9
26
84
4
66
45
0
0
54
0.99
67275--67358
39
2.2
39
93
0
141
17
14
32
35
1.90
68835--68871
2
18.5
2
100
0
74
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70407--70465
30
2.0
30
89
0
91
30
22
6
40
1.79

Tables:   1

The End!