Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004174.1 Hibiscus syriacus cultivar Beakdansim tig00009129_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66285

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2026--2055
13
2.4
13
94
5
53
26
30
0
43
1.55
6065--6215
35
4.2
35
84
7
151
32
2
35
29
1.71
6113--6170
13
4.7
13
70
12
50
29
1
39
29
1.67
6076--6215
38
3.9
36
88
2
174
32
2
36
28
1.69
6066--6215
71
2.1
70
85
5
192
32
2
36
29
1.72
10424--10475
26
2.0
26
82
17
63
57
0
19
23
1.40
10628--10746
35
3.4
35
83
2
148
31
4
35
28
1.76
13861--13890
13
2.4
13
94
5
53
43
0
30
26
1.55
18097--18138
20
2.2
19
86
4
57
33
9
7
50
1.62
29991--30066
35
2.2
35
87
0
107
31
2
38
27
1.71
32716--32774
17
3.5
17
68
13
50
28
15
8
47
1.74
34813--34928
35
3.3
34
87
3
160
30
3
37
28
1.74
34870--34929
13
4.8
13
74
12
54
33
1
38
26
1.67
35270--35320
19
2.6
20
84
6
68
45
5
11
37
1.65
38911--39026
35
3.3
35
91
1
187
31
0
38
28
1.63
38968--39025
13
4.7
13
68
12
50
31
0
41
27
1.56
39369--39419
19
2.6
20
87
3
68
45
5
15
33
1.71
41342--41379
2
19.5
2
89
5
60
47
2
0
50
1.15
46259--46300
22
1.9
22
90
0
66
57
21
4
16
1.58
50924--50983
13
4.5
13
79
6
66
1
18
3
76
1.00
54023--54067
21
2.0
24
83
16
60
64
2
17
15
1.39
63372--63415
22
2.0
22
86
0
61
84
6
9
0
0.79

Tables:   1

The End!