Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004175.1 Hibiscus syriacus cultivar Beakdansim tig00009130_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47930

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108--161
18
3.1
17
79
12
56
24
7
0
68
1.15
141--226
24
3.5
24
74
15
59
16
11
1
70
1.21
2719--2763
22
2.0
22
82
4
54
31
11
35
22
1.89
10429--10472
7
6.4
7
82
12
56
84
2
13
0
0.73
10429--10469
21
2.0
21
90
0
64
82
2
14
0
0.76
13434--13475
21
2.0
21
86
9
59
54
2
7
35
1.41
21087--21111
9
2.8
9
100
0
50
36
12
0
52
1.39
23329--23389
23
2.7
23
86
0
77
21
22
31
24
1.98
38380--38404
3
8.3
3
100
0
50
0
0
32
68
0.90
40906--40934
10
2.9
10
100
0
58
41
20
10
27
1.85
42865--42909
18
2.6
17
86
13
58
4
13
0
82
0.82
42940--43374
44
9.9
44
88
0
494
30
14
22
31
1.94

Tables:   1

The End!