Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004176.1 Hibiscus syriacus cultivar Beakdansim tig00009131_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83147

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5069--5649
190
2.9
197
78
8
513
30
16
19
33
1.94
8398--8443
18
2.4
19
85
10
67
52
6
6
34
1.53
8482--8540
19
3.0
19
90
9
100
30
11
6
50
1.65
8766--8806
20
2.0
20
90
0
64
34
12
17
36
1.87
8791--8851
30
2.0
30
87
0
86
36
11
24
27
1.90
10621--10698
31
2.5
31
76
13
81
32
15
6
46
1.71
14583--14607
10
2.5
10
100
0
50
12
28
0
60
1.32
26810--26944
62
2.2
62
95
0
243
31
20
16
31
1.95
30642--30733
40
2.3
41
86
7
134
26
16
26
31
1.96
35225--35253
13
2.1
14
93
6
51
75
0
24
0
0.80
39352--39475
49
2.5
49
93
0
203
28
21
12
37
1.91
51317--51377
27
2.3
27
91
0
95
36
18
13
32
1.89
52695--52726
17
1.9
17
93
6
57
65
0
0
34
0.93
54843--54895
20
2.7
20
100
0
106
15
24
45
15
1.84
57012--57070
20
2.8
21
84
7
66
20
27
28
23
1.99
65168--65211
23
1.9
23
95
0
79
29
9
25
36
1.86
66475--66518
23
2.0
23
90
4
72
50
0
0
50
1.00
67511--67649
36
3.9
36
94
0
242
42
15
15
26
1.87
69583--69639
29
2.0
29
89
6
89
35
14
3
47
1.61
74388--74469
40
2.0
40
95
0
146
34
24
14
26
1.94
74823--74877
28
2.0
28
96
0
101
34
25
9
30
1.87

Tables:   1

The End!