Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004187.1 Hibiscus syriacus cultivar Beakdansim tig00009159_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49347

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3573--3614
22
1.9
22
90
9
68
59
19
16
4
1.54
14915--14940
7
3.7
7
100
0
52
73
0
11
15
1.11
23917--24015
35
2.8
35
90
1
153
33
4
37
25
1.75
25219--25287
22
3.2
22
62
22
56
42
14
4
39
1.66
25220--25311
42
2.2
42
100
0
184
43
14
6
35
1.71
35451--35522
32
2.3
30
79
9
81
6
16
4
72
1.23
43174--43204
13
2.4
13
94
0
53
35
32
9
22
1.87
44232--44280
18
2.7
18
93
0
80
20
2
36
40
1.64
44625--44697
37
2.0
37
94
2
130
21
20
8
49
1.75
45978--46022
21
2.1
21
100
0
90
20
17
24
37
1.93

Tables:   1

The End!