Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004189.1 Hibiscus syriacus cultivar Beakdansim tig00009162_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57462

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5880--5926
24
2.0
24
87
8
69
78
4
14
2
0.99
5888--5937
18
2.9
16
81
16
64
82
0
14
4
0.82
5888--5940
6
9.2
6
80
12
58
81
0
15
3
0.83
5888--5940
23
2.3
24
84
12
67
81
0
15
3
0.83
5894--5940
17
2.6
19
90
9
73
80
0
14
4
0.85
11452--11480
15
2.0
15
93
6
51
75
3
20
0
0.94
19919--19956
17
2.4
16
87
12
53
57
2
21
18
1.52
23304--23362
28
2.0
28
87
6
82
6
11
3
77
1.07
35135--35180
24
1.9
24
81
0
56
36
13
26
23
1.91
39539--39595
23
2.5
23
91
8
98
29
19
24
26
1.98
45280--45328
26
1.9
25
84
12
64
28
10
12
48
1.73
49393--49440
5
10.2
5
84
10
50
0
14
2
83
0.74
49395--49442
23
2.1
22
88
3
69
0
12
2
85
0.69
49394--49448
28
2.0
28
88
0
83
3
12
1
81
0.89
49399--49449
23
2.2
23
82
0
57
3
11
1
82
0.89
49437--49465
8
3.8
8
90
9
51
20
0
0
79
0.74

Tables:   1

The End!